Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0756 ATGACTGGTGGGAATTTCAATGCTCAAGCAAGGGTTTCTTCTCTAGATCTTGGTAACGAAGACTCATCCTCAACTCATCCGGATGAGCGAAAACCCAGGAAAAGAGGTAGAAAGCCTGCTAATGGAAGAGAAGAACCATTGAATCATGTCGAAGCAGAGCGACAGAGGCGGGAGAAGCTTAACCAGAGGTTCTACGCCTTAAGAGCCGTTGTTCCTAACATATCTAAAATGGACAAGGCCTCTTTGCTTGGCGATGCGATTACCTACATCACTGATCTCCAGATGAAGATCAAGGTGCTGGAAGCTGAGAAGAACATGATTAACAATAAGGATTTGAGGTTTCCAATCCCGGATTTTGATTTCCAAGCAAGAGAGGATGATGCAGTTGTGCTAGTCAGCTGCCCCTTGGATATCCACCCGGTTTCCGGAGTCGTCAAAATATTCCGGGAGCATCAAATTGTGGCTCAGGAGTCCAATGTTTCAACATCAGATGGTAAGGTTATTCACACATTCTCCATAAGAACTCAGGGTGGGGAAGCAGCTGCAATACAATTGAAGGAAAAACTTGAAGCATCCCTTTCCAAAAAGTGA 591 0.4501 MTGGNFNAQARVSSLDLGNEDSSSTHPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIKVLEAEKNMINNKDLRFPIPDFDFQAREDDAVVLVSCPLDIHPVSGVVKIFREHQIVAQESNVSTSDGKVIHTFSIRTQGGEAAAIQLKEKLEASLSKK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0756 196 SMART finulus 50 99 IPR011598 GO:0046983
Aev02g0756 196 Pfam Helix-loop-helix DNA-binding domain 48 94 IPR011598 GO:0046983
Aev02g0756 196 PANTHER TRANSCRIPTION FACTOR BHLH3 2 195 - -
Aev02g0756 196 CDD bHLH_AtAIB_like 41 110 - -
Aev02g0756 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 93 IPR011598 GO:0046983
Aev02g0756 196 Coils Coil 186 196 - -
Aev02g0756 196 PANTHER MYC 2 195 IPR045084 GO:0003700|GO:0006355
Aev02g0756 196 MobiDBLite consensus disorder prediction 1 55 - -
Aev02g0756 196 ProSiteProfiles ACT domain profile. 129 196 IPR002912 -
Aev02g0756 196 Gene3D - 33 110 IPR036638 GO:0046983
Aev02g0756 196 MobiDBLite consensus disorder prediction 1 21 - -
Aev02g0756 196 MobiDBLite consensus disorder prediction 22 55 - -
Aev02g0756 196 Coils Coil 90 110 - -
Aev02g0756 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 109 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0756 Aev-Chr2 6315744 6316334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0756 28 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 65.089 9.59e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev02g0756 HLH 3.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0756 - - gmx:100819968 315.464