LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g0736	ATGGAGGAAGTTGAACAAGCTAATAGAGCAGCTGTTGAAAGCTGCCATAGAGTTCTAAGCATGTTGTCTCAGCCAAGGGATCAGGTTCAGGTTCATCATAGGAATTTAATGGTGGAAACTGGTGAAGCTGTTTTGAGGTTCAAGAAAGTTGTTACCTTGCTCAACAATGGTATAGGTCATGCAAGAGTTAGGAAGGTTAAGAAAATTCAATTACCCTTTTCCCAAAGTATCCTCTTAGATAACCCAAATTGCTTCAAGACCAAAAACAATCATCATAATCAATCAAAGAAGGTGCAGTTCCCACTAGCAAGTTTTCATGAGAGTTCGATTCAGGAATCGGGGTCGAAAGTTGGGAACTCACTCACCCTTGCAAACCCTTCTTTGGAATTGAGCTCGAACGGGAAGAGTCCAATTCAACTTAACCAACAAGGTTCATCGAATCATTATAACCTCCTTCAGCAGCAGCAACTGCAACAACAGAGGTTGTTGGTGCAGCAGCAACAAATGAAGCATCAAGCGGAAATGATGTTCCGGCGGAACAATAGTGGCATAAGCCTGAATTTTGATAGCACTAGCTGCACACCGACAATGTCATCCAATAGGTCTTTCATTTCATCGTTGAGCATAGACGGAAGCGTGGCGAACTTGGATGGAAGTGCCTTCCATCTAATAGGAGCTCCACATTCTTCTGATCAGAATTCACAACAGCATAAGAGAAAATGTTCTGCAAGAGGCGACGAGGGCAGCATGAAATGCACGAGCAGTGCTAGATGCCATTGCTCGAAGAAGAGGAAACACAGAGTAAAGAGATCAATTAAGGTTCCTGCTATCAGCAACAAACTTGCAGACATTCCTCCTGATGATTATTCGTGGAGGAAGTACGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATATTACAAGTGTAGCAGCATGAGAGGTTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAACCTACAATGCTAATTGTTACCTATGAAGGAGAACATAACCACCCTAAGATACCAACACAATCTGCAAATGCATGA	1062	0.4369	MEEVEQANRAAVESCHRVLSMLSQPRDQVQVHHRNLMVETGEAVLRFKKVVTLLNNGIGHARVRKVKKIQLPFSQSILLDNPNCFKTKNNHHNQSKKVQFPLASFHESSIQESGSKVGNSLTLANPSLELSSNGKSPIQLNQQGSSNHYNLLQQQQLQQQRLLVQQQQMKHQAEMMFRRNNSGISLNFDSTSCTPTMSSNRSFISSLSIDGSVANLDGSAFHLIGAPHSSDQNSQQHKRKCSARGDEGSMKCTSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKIPTQSANA*	354

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev02g0736	353	SUPERFAMILY	WRKY DNA-binding domain	283	345	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev02g0736	353	PANTHER	WRKY DNA-BINDING PROTEIN 21-RELATED	2	352	-	-
	Aev02g0736	353	Gene3D	WRKY domain	271	347	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev02g0736	353	SMART	WRKY_cls	285	345	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev02g0736	353	MobiDBLite	consensus disorder prediction	226	247	-	-
	Aev02g0736	353	Pfam	WRKY DNA -binding domain	287	344	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev02g0736	353	ProSiteProfiles	WRKY domain profile.	280	346	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev02g0736	353	Pfam	Plant zinc cluster domain	238	283	IPR018872	-
	Aev02g0736	353	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	2	352	IPR044810	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g0736	Aev-Chr2	6129103	6131011	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev02g0736	1	350	WRKY Transcription Factor Family	AT2G30590	57.552	3.25e-134	386

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Aev02g0736		WRKY	5e-26	CL0274