Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0722 ATGATGGTGTTTGAGGAAACTGAATTAAGGTTGGGGCTTCCTGGAAATAATAATAACAAGAAGAATAATGGAGCCACCGGTGAAGGAGAAGTTATGATGATGAGGAAGAGAGGATTCTCTGAGACTGTGGTCGAGGCTGAGACTGAGACTGAGGTCGAGACAAATACTACTATCGATTTGATGCTGAATCTCTCATCATCCAAGAAGGAAGCAACAAATGATAAGAATGGGGCAAATCCATGTGACAACAGGCAGCACAAGGCTTCACCCAAGGAGAAGGCACTCTTGCCTTCTGATCCTGCCAAGCCTCCTGCTAAGGCGCAAGTTGTGGGTTGGCCACCGGTACGGTCATACCGGAAGAACATGTTTGCATCATCAGCTCAAAAGAGCGGCGGCGGCAGCAACGGCGGCGAAGAGAGCGAGAAGAATGGACTGAGCTTTGTGAAAGTGAGCATGGATGGAGCACCTTACCTGCGCAAAGTGGACTTGAAGATCTACAAGAGTTACCCTGAGCTTTCTGATGCCTTAGGCAAAATGTTTAGCTCCTTCACCATTGGAAATTGTGAATCCCAAGGAATGAAGGATTTCATGAACGAGAGTAAGCTGATGGATCTGTTGAACAGCTCCGATTATGTCCCAACCTATGAAGATAAGGATGGAGATTGGATGCTTGTCGGTGATGTCCCTTGGGAGATGTTTGTTGAATCTTGCAAGCGTCTGCGCATCATGAAAGGAAAAGAGGCAATTGGACTCGCACCTAAAGCCATGGAGAAATGCAAGAATAGGAGCTAA 792 0.4684 MMVFEETELRLGLPGNNNNKKNNGATGEGEVMMMRKRGFSETVVEAETETEVETNTTIDLMLNLSSSKKEATNDKNGANPCDNRQHKASPKEKALLPSDPAKPPAKAQVVGWPPVRSYRKNMFASSAQKSGGGSNGGEESEKNGLSFVKVSMDGAPYLRKVDLKIYKSYPELSDALGKMFSSFTIGNCESQGMKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPKAMEKCKNRS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0722 263 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 2 256 IPR003311 GO:0005634|GO:0006355
Aev02g0722 263 MobiDBLite consensus disorder prediction 68 83 - -
Aev02g0722 263 MobiDBLite consensus disorder prediction 68 108 - -
Aev02g0722 263 Gene3D - 139 257 - -
Aev02g0722 263 ProSiteProfiles PB1 domain profile. 145 245 IPR000270 GO:0005515
Aev02g0722 263 SUPERFAMILY CAD & PB1 domains 143 244 - -
Aev02g0722 263 PANTHER AUXIN-INDUCED PROTEIN AUX28 2 256 - -
Aev02g0722 263 Pfam AUX/IAA family 6 254 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0722 Aev-Chr2 5993120 5997732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0722 138 248 B3 DNA Binding Superfamily AT3G61830 32.432 6.58e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev02g0722 AUX_IAA 1.6e-87 CL0072