Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0699 ATGTTCCCACCACAAGCTATAGTTATGTCCAACAATTCAACTTCTTTGTCTGAAGAAGCAGCCAGTGTCTCTTCTGGTACTAGAATTCAAGATTTTGGTTGTGGTGGAGCTGCTTCCTTGAATCATCATGTGATATCAACCAATAATAATAATAATATTATTATTCTTCCTCAGAATAATAATAATAATAATAATAATATTCAGCCCCAAAAGATCAAGAAAAAGAGAAGCCTCCCTGGAAATCCTGACCCAGATGCTGAAGTGATAGCTCTATCACCAAAAACACTTCTAGCAACAAATAGGTTTGTGTGTGAGATTTGCAACAAGGGATTCCAAAGGGATCAGAACCTTCAACTCCATAGGAGAGGACACAACCTTCCATGGAAGCTTAAGCAAAGGAACAACAAAGAGGTTAAGAAGAGAGCTTATGTGTGTCCTGAGCCTTCATGTGTCCACCATAACCCTTCAAGGGCACTTGGTGACCTAACTGGGATCAAGAAGCACTATTGTAGAAAACATGGTGAGAAAAAATGGAAGTGTGAAAAGTGTTCCAAGATCTATGCTGTTCAATCTGATTGGAAGGCTCATTCTAAGACTTGTGGCACTAGAGAATATAGATGTGATTGTGGAACCCTTTTCTCCAGGAAGGACAGCTTCATAACCCATAGAGCATTCTGTGATGCATTGGCTGAAGAGAGTGCAAGGCTTTCAGCAAACCACCACCACCAATTAATAATCCCATCACAACCCACAAACCATCTTATTAACCCTTCTTCTCCTTCTTCATCATTAGTCCATTCTCTCTTCCTCTTCCCATCCCAACACTTCCAAAACCACACCATTAATCCATTATGGGACCCACCATCTCATCAACAAAACCCTAACCCTAGCACCACCACCACCAACAACAACAATAATAACCTCTTTGCTTCTAATTCTAATTCCATTCTCCACAATAGCAACAATATCAAGCCTGAACTTCAAAACTTTCATCATCATCATCACATCCCAAACAACAATATGATGATGACGAAGTCATCATCATCACCCTTTAGGAACCCACACGTGCGCATGCCACCACCATCACAACCTCATAATACTCCTCCTCCTTCTGCCGCCACGTCAGCACACCTTTCAGCCACTGCTCTTCTCCAGAAGGCCGCAACCGTCGGCGCCGCCGCCATCACGGGACCTAATAACAATAACGGCTCCCTTGAAGCTGCTGGGAGCAGCCACCATCGCGTGACTCGGCACGTGACCGAGTTCGGAGGAACAACAATGACTCATCAGCTTGACTCGGTGATGGTGCCACATCATCATAATCACTACATGAACAACAACATTGGCCTTAAGAGTAGTGATGATCTCACAAGGGACTTTCTAGGGCTAACAAGTGACGGCGGTGGCGGAAATGGTGGTGCAGTTGATGTTAGCATGAACATGAAGGACATGCTAACGTACACGGGGAGCGTGGATTACCAACAACATCATCATCAGCACTCATTGTTCAAACCACAACAAGGTTTTGGGTTCCTTGGGACAGCCACTGCCCCTGAGTCATGGGGCAATTGTTGA 1575 0.4419 MFPPQAIVMSNNSTSLSEEAASVSSGTRIQDFGCGGAASLNHHVISTNNNNNIIILPQNNNNNNNNIQPQKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEVKKRAYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSANHHHQLIIPSQPTNHLINPSSPSSSLVHSLFLFPSQHFQNHTINPLWDPPSHQQNPNPSTTTTNNNNNNLFASNSNSILHNSNNIKPELQNFHHHHHIPNNNMMMTKSSSSPFRNPHVRMPPPSQPHNTPPPSAATSAHLSATALLQKAATVGAAAITGPNNNNGSLEAAGSSHHRVTRHVTEFGGTTMTHQLDSVMVPHHHNHYMNNNIGLKSSDDLTRDFLGLTSDGGGGNGGAVDVSMNMKDMLTYTGSVDYQQHHHQHSLFKPQQGFGFLGTATAPESWGNC* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0699 524 MobiDBLite consensus disorder prediction 280 321 - -
Aev02g0699 524 MobiDBLite consensus disorder prediction 354 368 - -
Aev02g0699 524 SMART c2h2final6 178 198 IPR013087 -
Aev02g0699 524 SMART c2h2final6 143 173 IPR013087 -
Aev02g0699 524 SMART c2h2final6 102 124 IPR013087 -
Aev02g0699 524 SUPERFAMILY beta-beta-alpha zinc fingers 101 198 IPR036236 -
Aev02g0699 524 MobiDBLite consensus disorder prediction 345 376 - -
Aev02g0699 524 Gene3D Classic Zinc Finger 171 237 - -
Aev02g0699 524 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 12 502 - -
Aev02g0699 524 ProSiteProfiles Zinc finger C2H2 type domain profile. 102 124 IPR013087 -
Aev02g0699 524 ProSitePatterns Zinc finger C2H2 type domain signature. 104 124 IPR013087 -
Aev02g0699 524 Gene3D Classic Zinc Finger 81 150 - -
Aev02g0699 524 PANTHER PROTEIN INDETERMINATE-DOMAIN 12 12 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0699 Aev-Chr2 5673390 5678533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0699 60 463 IDZ Gene Family AT5G66730 46.491 9.59e-113 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g0699 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0699 K25870 - gmx:100780056 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0699 02 5673390 5678533 Aev06g0027 06 240046 242647 PCT