Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0617 ATGATTGGTTTGGTGAAGATGATTCCTTGGGGTGGAATCAGTTGTTGTTTGAGTGCAGCTGCACTCTACCTTCTTGGAAGAAGCAGTGGCAGGGATGCGGAGCTTCTTAAATCTGTGACACGGGTCAATCAATTGAAGGAATTGGCGCAACTGTTAGACTCAGAAATATTACCCTTGGTTGTTTCCATTTCTGGAAGAGTTGGCTCTGAAACCCCAATTAACTGTGAGTTCAGTGGTTTAAGAGGTGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCCTGGATACAAGATTCTGCTTTAATGCTATCCATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGAAGTGGTCGTGTGCATGTTGTTGGAGCTCGGGGTGCCACTGGTTTTGCATTACCTGTTGGGAGTGAGGTATTTGAAGAGTCTGGCAGATCACTTGTCCGTGGAACATTGGACTATCTCCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGGGTACTTCCCGTTGGAACTTCGTTGACTGTTGTTGGTGAGGCTGCTAAAGATGACATTGGGACCATTAGAGTTCAGCGACCCCACAAAGGGCCATTTTATGTCTCTCCCAGAACAATTGATCAACTAATTGCAAATCTAGGGAAATGGGCAAGGTGGTATAAGTATGCATCTATGGGCTTGACATTATTTGGTGCTTATCTAATAGCTAAGCATGCTATTCGGTACATCTTGGAAAGACGGCGCCGTTCCGAACTGCAAAGAAGGGTTCTTGCTGCAGCTGCTAAGAGGTCAGGAATAGATAATGAAGGTGAAAAGGCTGACAACTTATCAGATGGTGCAAAAAAGGATCGCTCGATGCCAGATTTGTGTGTAATATGCCTCGAGCAGGAATACAACGCCGTTTTTGTTCCATGTGGGCACATGTGCTGCTGTACAGCTTGCTCGTCGCACTTAACTAGTTGCCCTCTTTGCCGACGACGAATAGAGCAGGTAGTAAAGACTTTTCGCCATTGA 1038 0.4509 MIGLVKMIPWGGISCCLSAAALYLLGRSSGRDAELLKSVTRVNQLKELAQLLDSEILPLVVSISGRVGSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGSGRVHVVGARGATGFALPVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDIGTIRVQRPHKGPFYVSPRTIDQLIANLGKWARWYKYASMGLTLFGAYLIAKHAIRYILERRRRSELQRRVLAAAAKRSGIDNEGEKADNLSDGAKKDRSMPDLCVICLEQEYNAVFVPCGHMCCCTACSSHLTSCPLCRRRIEQVVKTFRH* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0617 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 344 IPR013083 -
Aev02g0617 345 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 7 312 - -
Aev02g0617 345 PANTHER - 7 312 IPR044231 GO:0004842|GO:0016567
Aev02g0617 345 CDD RING-HC_LRSAM1 297 336 - -
Aev02g0617 345 ProSiteProfiles Zinc finger RING-type profile. 298 333 IPR001841 -
Aev02g0617 345 Pfam E3 Ubiquitin ligase 91 239 IPR022170 GO:0004842|GO:0006996|GO:0016567
Aev02g0617 345 Pfam Zinc finger, C3HC4 type (RING finger) 296 339 - -
Aev02g0617 345 SUPERFAMILY RING/U-box 297 339 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0617 7 278 C3H Transcription Factor Family AT1G63900 78.102 1.11e-158 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0617 K15688 - gmx:100803252 630.172