Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0557 ATGGACTTGTATGTTCGGAGCCCCGCGAGAAACGGGTCGAACCCGAAAATCCAACCCGAATGGAGCGCTCCAAGCCCCAATACTGCACTCGAAGAATCGATGTGGCATTTGACGGTGAGTGGTGGAGAATCTTACCCAGAGCGACTTGGCGTGCCGAATTGTGTGTATTACATGCGTACAGGGTTCTGTGGATATGGTAGCAAGTGTCGTTACAATCATCCCCTTGATCGTGCTGCGGTCGATGCAGCTGTAAGAGCTACAGGAGACTACCCAGAACGGGTGGGGGAACCTCCATGTCAGTTTTATTTAAAAACTGGAACCTGTAAATTTGGTGCATCCTGTAAATTCCACCATCCCAAACATGGAGGTGGATCTTTAAGCCAAGCTCCACTAAATAGTAGTGGATACCCGTTACGGCTGGGTGAGAGTGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGTATAACTTGTAAATACCATCATCCTCAACCTGCTGGCACATCATCGCCTTCATCTACACCTCAATTTTATCAACAGGCGCAGTCTCCTACGGGCCCTCTACCGGAGCAGTATGGGGGAACATCCACAGGCTTGAGGGTGGCTAGGCCTCCTTTATTACCTGGTTCATATGTACAAGGGGCTTATGGTCCTGTACTTCTTTCCCCAGGGGTAGTCCCGTTTCCTGGATGGAGTCCTTATTCGGCACCTGTAAGTCCTGCGTTATCTCCTGGTGCTCAACCTGCTGTTGGGGCTACTTCTGTGTATGGAGTTTCCCAGTTATCTCCATCAACATCAGCTTTTGCTAGACCATATACCCCTTTGCCCTCTTCTACTGTTCCCTTAGGAACCATTCAAAAGGAACAATCATTTCCTGAAAGACCTGGTGAGCCTGAATGCCAATACTATCTGAGAACAGGGGACTGTAAATTTGGATTAGCTTGTCGATTTCACCATCCTCAGGACCACATTGTGACGCGGCCACTTCTTAGTCCCTCTGGGCTTCCTTTACGTCCGGGCGTACAACCTTGTGCATTTTATTTGCAAAATGGACATTGCAAGTTTGGTTCCACATGCAAATTTGATCATCCTTTGGGATCTATGAGATACAGTCCATCGGCATCATCTCTCATCGACATGCCAGTTACACCGTACCCTGTTGGGTCTTTGCTGTCTAGCCTGGCTCCTTCGACGTCTTCGGAGCTTCGGTCTGAACTCATGCCTGGGTCCAAAAAGGAATCTTTTGCAGCCATAATGCCTTCTGGAAATAGCACAGGTACTTCTGTCGGTTTAATTTTCTCACAAGGTGGATCTGTTTCACTATCTGATGTGGCACTCTCAACTTAA 1353 0.4812 MDLYVRSPARNGSNPKIQPEWSAPSPNTALEESMWHLTVSGGESYPERLGVPNCVYYMRTGFCGYGSKCRYNHPLDRAAVDAAVRATGDYPERVGEPPCQFYLKTGTCKFGASCKFHHPKHGGGSLSQAPLNSSGYPLRLGESECSYYLKTGQCKFGITCKYHHPQPAGTSSPSSTPQFYQQAQSPTGPLPEQYGGTSTGLRVARPPLLPGSYVQGAYGPVLLSPGVVPFPGWSPYSAPVSPALSPGAQPAVGATSVYGVSQLSPSTSAFARPYTPLPSSTVPLGTIQKEQSFPERPGEPECQYYLRTGDCKFGLACRFHHPQDHIVTRPLLSPSGLPLRPGVQPCAFYLQNGHCKFGSTCKFDHPLGSMRYSPSASSLIDMPVTPYPVGSLLSSLAPSTSSELRSELMPGSKKESFAAIMPSGNSTGTSVGLIFSQGGSVSLSDVALST* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0557 450 MobiDBLite consensus disorder prediction 1 25 - -
Aev02g0557 450 ProSiteProfiles Zinc finger C3H1-type profile. 340 368 IPR000571 GO:0046872
Aev02g0557 450 SUPERFAMILY CCCH zinc finger 301 325 IPR036855 GO:0046872
Aev02g0557 450 PANTHER PROTEIN PHOSPHATASE RELATED 18 432 - -
Aev02g0557 450 SUPERFAMILY CCCH zinc finger 51 76 IPR036855 GO:0046872
Aev02g0557 450 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 18 432 - -
Aev02g0557 450 ProSiteProfiles Zinc finger C3H1-type profile. 48 76 IPR000571 GO:0046872
Aev02g0557 450 Gene3D - 294 378 - -
Aev02g0557 450 Gene3D - 48 123 - -
Aev02g0557 450 MobiDBLite consensus disorder prediction 11 25 - -
Aev02g0557 450 ProSiteProfiles Zinc finger C3H1-type profile. 139 167 IPR000571 GO:0046872
Aev02g0557 450 ProSiteProfiles Zinc finger C3H1-type profile. 296 324 IPR000571 GO:0046872
Aev02g0557 450 SUPERFAMILY CCCH zinc finger 343 371 IPR036855 GO:0046872
Aev02g0557 450 SMART c3hfinal6 296 323 IPR000571 GO:0046872
Aev02g0557 450 SMART c3hfinal6 48 75 IPR000571 GO:0046872
Aev02g0557 450 SMART c3hfinal6 93 120 IPR000571 GO:0046872
Aev02g0557 450 SMART c3hfinal6 139 166 IPR000571 GO:0046872
Aev02g0557 450 SMART c3hfinal6 340 367 IPR000571 GO:0046872
Aev02g0557 450 SUPERFAMILY CCCH zinc finger 96 120 IPR036855 GO:0046872
Aev02g0557 450 SUPERFAMILY CCCH zinc finger 142 167 IPR036855 GO:0046872
Aev02g0557 450 MobiDBLite consensus disorder prediction 167 194 - -
Aev02g0557 450 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 51 74 IPR000571 GO:0046872
Aev02g0557 450 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 342 366 IPR000571 GO:0046872
Aev02g0557 450 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 298 323 IPR000571 GO:0046872
Aev02g0557 450 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 142 166 IPR000571 GO:0046872
Aev02g0557 450 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 96 120 IPR000571 GO:0046872
Aev02g0557 450 MobiDBLite consensus disorder prediction 167 199 - -
Aev02g0557 450 Gene3D - 131 175 - -
Aev02g0557 450 ProSiteProfiles Zinc finger C3H1-type profile. 93 121 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0557 Aev-Chr2 4289173 4292710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0557 20 447 C2H2 Transcription Factor Family AT5G18550 51.786 7.34e-131 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev02g0557 zf-CCCH 9.7e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0557 - - gmx:100812475 782.711