Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0551 ATGGCAAGAAAGAGATTCGTGTGTGAGATATGCAAGAAAGGGTTTCAGAGGGACCAGAACCTTCAGCTGCACAGGAGAGGCCACAACCTGCCATGGAAGCTGAGGCAGAGGGCAGAGGCGAAGAAGAAGAGGGTGTACGTGTGCCCCGAAGAGGCGTGTGTGCACCATAACCCAGCCCGGGCATTAGGGGACCTGACAGGGATAAAGAAACACTACAGCAGGAAACATTGTGAGAAGAAGTGGAAATGTGACAAGTGCTCTAAAACATATGCTGTCCAATCTGATTGGAAGGCCCACCTCAAAACTTGTGGGACCAGAGATTACAAATGTGATTGTGGAACCATATTTTCCAGGAGGGACAGTTTCATCACACACAGAGCCTTTTGTGATGCATTAACTGAGGAAAACAACAGAGTGAATAACCAACAAGGATTAACAAATGGAATACCACAAAACTTGCAAAATGAAGTTCCTGATCTTATGACCACAATGACCACAATGCCCCTAAGCACCAGTTCAATTTCCAACCCTGCATCTGATCAAATCATCAACAACAGCAACAATAACAACAACTATGACCTCAATAGGAACAACCCTCTTAGAACACTCTCCCAAGAAATTGTCCCTTCAATGCAATTCAAGTCAATGAACAATATCATTGGTGGGGGCATGTTTTCCACAACAACAAGCTCATCAAGTACACTTTTTGGTGGTCCTAAAACAGTTCCTCCCTCCTCTTCTCCAAGTCTTCAACTCAGCACCAACAACTCCTCTGGTTTCAATTACTTCCAACAACAAGACTGTAAGAACAACAACTTAGCCCTAATCTCTGGCTCAGCTCACATGTCTGCAACAGCTTTACTGCAGAAAGCAGCACAAATGGGAGCCACTGCAAGCAACAACAGCATTAACTCACCTTTGATGCAGAAAAGCTTTGTTACTACCATGGCTGGTCCTGATCAGGTATCTTCCCCTAGACCACCACCACCATATAACCCCTCTTCCTATGATCATTTCCATGCACAAAAACATGATCAATCACACATGCCCTTCACAAACCAACAATTCTTTCATAAAGGGCAACAAGAAATGCCAATGATATTTGATGCTAATAACAATAGTTCTAATAATAATGGATCAACAATGAATGATCAAATGGGAATGTTTAGCACAATGTTCATGGGAAGTAACCACAGCAACACAGGGTTGATGAAAGATAATAATAATAATGTGGAACAAGATGCTGGTACCAATGCTCATGGAAGAGATATTGCAGAAGGGAATAACCAAATGGGGTCAGTGCCAATGTTTGGAGGGAGTGATGATATGACAACAGTTCATGATTTCTTGGGAATTGGAGGGTCAACTCCAAGGGGTGGTGGTAGTGGTTTGCATCAATCACAGAAACATCATCATCAACAACAAAGAATGGAATTAGATGCATTGAGCCACCAGAGGTTACCATTTGTTAATCATTTTCATCAGCATCGGCTTCAACATGGAGATTCAGCTATGGAGAAATCTGTTTGGGGACATTTGTGCTGA 1545 0.4285 MARKRFVCEICKKGFQRDQNLQLHRRGHNLPWKLRQRAEAKKKRVYVCPEEACVHHNPARALGDLTGIKKHYSRKHCEKKWKCDKCSKTYAVQSDWKAHLKTCGTRDYKCDCGTIFSRRDSFITHRAFCDALTEENNRVNNQQGLTNGIPQNLQNEVPDLMTTMTTMPLSTSSISNPASDQIINNSNNNNNYDLNRNNPLRTLSQEIVPSMQFKSMNNIIGGGMFSTTTSSSSTLFGGPKTVPPSSSPSLQLSTNNSSGFNYFQQQDCKNNNLALISGSAHMSATALLQKAAQMGATASNNSINSPLMQKSFVTTMAGPDQVSSPRPPPPYNPSSYDHFHAQKHDQSHMPFTNQQFFHKGQQEMPMIFDANNNSSNNNGSTMNDQMGMFSTMFMGSNHSNTGLMKDNNNNVEQDAGTNAHGRDIAEGNNQMGSVPMFGGSDDMTTVHDFLGIGGSTPRGGGSGLHQSQKHHHQQQRMELDALSHQRLPFVNHFHQHRLQHGDSAMEKSVWGHLC* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0551 514 MobiDBLite consensus disorder prediction 231 252 - -
Aev02g0551 514 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Aev02g0551 514 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 479 - -
Aev02g0551 514 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Aev02g0551 514 MobiDBLite consensus disorder prediction 453 476 - -
Aev02g0551 514 SUPERFAMILY beta-beta-alpha zinc fingers 4 101 IPR036236 -
Aev02g0551 514 Pfam Zinc finger, C2H2 type 6 28 IPR013087 -
Aev02g0551 514 Gene3D Classic Zinc Finger 3 29 - -
Aev02g0551 514 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 1 479 - -
Aev02g0551 514 SMART c2h2final6 81 101 IPR013087 -
Aev02g0551 514 SMART c2h2final6 46 76 IPR013087 -
Aev02g0551 514 SMART c2h2final6 6 28 IPR013087 -
Aev02g0551 514 Gene3D Classic Zinc Finger 59 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0551 Aev-Chr2 4248108 4251115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0551 1 303 IDZ Gene Family AT3G50700 49.521 1.17e-91 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g0551 zf-C2H2 0.01 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0551 - - ahf:112730641 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0551 02 4248108 4251115 Aev02g0551 02 4248108 4251115 ECH