Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0537 ATGAAGTTTTGTAAGACATACCAAGAGTACATGCAATGCCAGGAAGAGAAACTTCCTGTGGTTGGATTCAAGAAGCTCAAGAAGATCATGAAAAAGTGTAGGGGTTGTGAATCATCACATAGAAATCATAATGGAATTAATTCTTGCCCTAATCAATGCCCAGTGTGTGATGGAACATTCTTCCCTTCACTTCTCCATGAAGTGTCAGAGATTGTAGGATGCTTCAACCAGCGAGCACAGAAGTTGCTTGAGCTTCATCTTGCTTCTGGATTCAGGAAGTACTTTTTCTGGTTGAAAGGGAAATCACAAAATAAGCATTCTGCTCTTGTTAAACAAGGCAAAGATCTCGTCACTTATGCGCTGATCAACGCCATCGCGATTCGCAAAATACTCAAGAAGTATGATAAGATTCATTATTCAAAACAAGGGCAATTATTCAAGTCACAAGTTCAGACAATGCACAAGGAGATTCTGCAGAGTCCTTGGCTTATTGAGTTAATGGCACTATACATAAACTTAAGGGAAAAAAATGTCAAGTCAAGGAAAGCATGTGCCTTGTTTGATGGATGTTCCCTTACATTTAAGGATGGAAAACCATCACTTACTTGTGAGCTCTTTGATTCCATCAAAGTTGATATTGATTTGACTTGCTCTATATGCTTGGACACAGTGTTTGATCCAGTAGCTTTAACATGTGGCCACATATTCTGTTACACTTGTGCTTGCTCAGCTGCATCAGTAACTATTGTTGATGGACTTAAAGCGGCAGATCCTAGAGAGAAATGTCCTCTATGCAGAGAAGGAGGAATGCATGAAGGTGCTGTGCACTTGGAAGAATTAAATGTTCTGTTAGGCCGAAGCTGCAAGGATTACTGGGAGGAAAGGCTTCAGATGGAGAGGGTAGAAAGGGTTAAACAGGTGAAGGAGCATTGGGAATCACAATGTAGGGCCTTCATGGGAATATAA 966 0.4058 MKFCKTYQEYMQCQEEKLPVVGFKKLKKIMKKCRGCESSHRNHNGINSCPNQCPVCDGTFFPSLLHEVSEIVGCFNQRAQKLLELHLASGFRKYFFWLKGKSQNKHSALVKQGKDLVTYALINAIAIRKILKKYDKIHYSKQGQLFKSQVQTMHKEILQSPWLIELMALYINLREKNVKSRKACALFDGCSLTFKDGKPSLTCELFDSIKVDIDLTCSICLDTVFDPVALTCGHIFCYTCACSAASVTIVDGLKAADPREKCPLCREGGMHEGAVHLEELNVLLGRSCKDYWEERLQMERVERVKQVKEHWESQCRAFMGI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0537 321 ProSiteProfiles SPX domain profile. 1 148 IPR004331 -
Aev02g0537 321 SUPERFAMILY RING/U-box 210 268 - -
Aev02g0537 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 319 IPR013083 -
Aev02g0537 321 ProSitePatterns Zinc finger RING-type signature. 232 241 IPR017907 -
Aev02g0537 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 321 IPR033326 -
Aev02g0537 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 321 - -
Aev02g0537 321 CDD SPX_BAH1-like 2 144 - -
Aev02g0537 321 Pfam Zinc finger, C3HC4 type (RING finger) 214 267 - -
Aev02g0537 321 SMART ring_2 217 265 IPR001841 -
Aev02g0537 321 ProSiteProfiles Zinc finger RING-type profile. 217 266 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0537 Aev-Chr2 4105694 4108513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0537 207 266 C3H Transcription Factor Family AT4G28270 40.299 9.74e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0537 K16275 - gmx:100797432 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0537 02 4105694 4108513 Aev02g0537 02 4105694 4108513 ECH
Aev02g0537 02 4105694 4108513 Aev06g0583 06 4078645 4080663 PCT