Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0508 ATGAGAACCTCATGGGCAGATTCTGCTGACAATTCAGCCATTGGTTCCTCCAACACCCATGCATCTGTGCAGTCTAATCGCCCGGCTTATGTTCCTCCACATCTTCGCAACCGGCAATCAGCTTCTGAATCCCATGCTCCAACATCAAATTTCGTGCCACCGCATCCGGCTAATGATAGGGTGAATTACGGCGGTCCAACTGCTGCTTCTTATGGGGGCAGCTCCTTTAATAAGACTGATCTCGGGCGGCAAGGATATGGCTCTAGCTTTCAGAGTGGTGGTGGTGTCTGGAACAACAATAGAGGGGGAGGGAGGGACCGTGGAAGGCGTGAGGTGAACCCTTTTGAGAATGATGAAGCTGCAGGTCAATCGATTGGTGAGCAGGAAAATGCAGGGATTAACTTTGATGCTTATGAGGATATCCCTGTGGAGACTAGTGGGGAAAATGTGCCTCCGCCTGTGAATACATTCGCGGAAATTGACTTGGGCGATGCGTTGAATCAGAATATAATGCGATGCAAGTATGTTAAGCCTACACCAGTTCAGAGGTATGCCATACCGATTTCTCTTGCTGGACGAGATTTGATGGCTTGTGCTCAGACAGGTTCAGGGAAGACTGCTGCCTTTTGCTTCCCTATTATAAGTGGAATCATGAGGGAGCAGTATGTACAAAGACCACGTGTAGCACGAACTGCTTTCCCTTTGGCACTCATCCTCTCCCCTACTCGGGAGCTTTCATGTCAGATACATGATGAGGCCAAAAAGTTTTCTTACCAAACTGGCGTCAAGGTGGTAGTTGCTTATGGAGGAGCACCAATCAACCAACAGTTGCGGGAGCTCGAGAGAGGAGTTGACATTCTGGTTGCAACTCCAGGGCGATTGGTAGATTTGCTTGAGAGGGCTAGGGTGTCACTGCAGATGATAAGATACCTGGCTCTTGATGAAGCAGATCGCATGCTGGATATGGGTTTTGAGCCTCAAATAAGAAAGATAGTTGAGCAAATGGACATGCCTCCTCCTGGCATGAGACAGACACTGCTGTTTAGTGCCACATTTCCAAAAGAGATACAGAGACTTGCATCAGACTTTCTTTCAAGTTATGTGTTTCTGGCTGTTGGAAGGGTCGGTTCAAGTACTGATTTAATCGCTCAAAGAGTAGAATATGTGCTCGAGTCAGATAAGAGAAGCCACCTCATGGACCTTCTTCATGCTCAGAGGGAAACTGGAATTGATGGGAAGCAAGGTCTGACATTAGTTTTTGTGGAAACAAAGAAAGGAGCCGACTCATTGGAACACTGCTTGTGTGTCAATGGGTTTCCTGCAACTAGCATTCATGGTGACAGAACACAACAAGAAAGAGAACTAGCATTGAGGTCTTTCAAGAGTGGGAACACACCAATTCTCGTAGCTACGGATGTTGCTGCTCGTGGTCTTGATATTCCTCGCGTAGCACACGTGGTAAATTTTGATCTTCCCAATGACATTGATGATTATGTGCACCGGATAGGACGAACCGGGAGAGCTGGTAAAATGGGACTAGCAACTGCCTTCTTCAACGAGAGCAATTTGTCCCTGGCTAAACCGCTGGCTGATCTGATGCAAGAGGCGAATCAAGAAGTACCAGCCTGGCTCACGCGATACGCATCAAGGGCTTCTTACGGTGGCGGCAACAGAAATAGGCGATCAGGGGGATCCCGCTTTGGTGGCCGCGATTTTAGGAGGGAGGGCTCGTTCAGCAAAGGAACAGATCACTATGGCGGAGCAGGCGGATATGGGGTTCCTAGCAGCTATGGTCCAGGTCAAGGTGTGACAAGTGCTTGGGATTAG 1827 0.4855 MRTSWADSADNSAIGSSNTHASVQSNRPAYVPPHLRNRQSASESHAPTSNFVPPHPANDRVNYGGPTAASYGGSSFNKTDLGRQGYGSSFQSGGGVWNNNRGGGRDRGRREVNPFENDEAAGQSIGEQENAGINFDAYEDIPVETSGENVPPPVNTFAEIDLGDALNQNIMRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRVARTAFPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQRLASDFLSSYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRETGIDGKQGLTLVFVETKKGADSLEHCLCVNGFPATSIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNESNLSLAKPLADLMQEANQEVPAWLTRYASRASYGGGNRNRRSGGSRFGGRDFRREGSFSKGTDHYGGAGGYGVPSSYGPGQGVTSAWD* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0508 608 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 41 582 - -
Aev02g0508 608 SMART helicmild6 428 509 IPR001650 -
Aev02g0508 608 CDD SF2_C_DEAD 382 518 - -
Aev02g0508 608 MobiDBLite consensus disorder prediction 37 51 - -
Aev02g0508 608 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 397 548 IPR001650 -
Aev02g0508 608 SMART ultradead3 174 385 IPR014001 -
Aev02g0508 608 MobiDBLite consensus disorder prediction 1 112 - -
Aev02g0508 608 CDD DEADc_DDX3_DDX4 156 376 IPR044763 GO:0003724|GO:0005524
Aev02g0508 608 MobiDBLite consensus disorder prediction 564 580 - -
Aev02g0508 608 Pfam DEAD/DEAH box helicase 179 359 IPR011545 GO:0003676|GO:0005524
Aev02g0508 608 MobiDBLite consensus disorder prediction 554 608 - -
Aev02g0508 608 Gene3D - 111 372 IPR027417 -
Aev02g0508 608 MobiDBLite consensus disorder prediction 1 26 - -
Aev02g0508 608 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 155 183 IPR014014 GO:0003724
Aev02g0508 608 Pfam Helicase conserved C-terminal domain 395 509 IPR001650 -
Aev02g0508 608 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 186 370 IPR014001 -
Aev02g0508 608 Gene3D - 373 553 IPR027417 -
Aev02g0508 608 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 52B-RELATED 41 582 - -
Aev02g0508 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 524 IPR027417 -
Aev02g0508 608 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0508 Aev-Chr2 3821637 3825053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0508 153 541 Eukaryotic Initiation Factors Gene Family AT3G19760 31.026 1.52e-60 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0508 K11594 - gmx:100818326 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0508 02 3821637 3825053 Aev02g0508 02 3821637 3825053 ECH