Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0504 ATGTTGTGTGTTTTCAGCATGAGGGGAAGAAGTTACAGCTACAGTCCCTCTCCTCCGAGGCGTTATAGCCGAAGACGGCGGAGCCCGAGTCCTAGGGGGCGCTACGGTGGTGGCCGTGGACGGGATTTGCCAACAAGCCTTCTGGTTCGAAACCTCCACAGAGATTGCAGGGTCGAAGATCTACGTGCCCCATTCGGCCACTTTGGTCCTCTCAAGGATGTTTATCTGCCTCGAGACTATTACACTGGGGAGCCACGTGGTTTTGGATTTGTTCAGTATGTGGATCCAGCCGATGCTGCCGATGCAAAATATCATATGGATGGTCAGATTCTGCTCGGTCGTGAGTTAACGGTGGTGTTTGCCGAGGAAAACAGAAAAAAACCTGCAGAAATGAGAGCTAGGGAGCGACGAAGGGATCGTTCGTACTCATATGACTATAGGAGATCTCCGCCGCATTCTCGCTCGCCACGCTATGCTCGAACTTATTCACGATTAACAACATCGTTTGCATTATTGAGTACTAATAGCCTTCATCATGGTTCAGGTCAATCTCACCCAGAGACAGAAAGTATAGGGGGCGATCATACTCCCGATCACCGTTTGTATCGAGAAGCCCCAGTCGTAGCAGGAGTTACAGTAGGAGCCCAGCTTACTCCCGGTGATGAAGTAGTAGAAGCGGAGTCATCTTCTGCACAATACATCATACAACACTTCACAGCTGCTACAGGGTGCAGGAAATTTGAAGGGACAGTAAAGAATGTTTTCACAACTGGAAAAGTTGAAATGGTTGTGGTTGATGAAGTTGGATCAGCTGCTACTAGTGGTGGTGGTGGTGTTAATGGTGCTATAGAAAAAGGGTGCTTTGTTATGTGGCAAATGGTCCCTGATAAGTGGCAAATAGAGCTTGTTTTGAGTGGCCAAAAAGTTATAGCTGGTAGCAATGGCGCGGTGGCTTGGCGCCACACTCCATGGCTCGGTACACATGCTGCTAAAGGCGGCGTTCGCCCTCTTCGCCGCGCTCTTCAGGGACTAGACCCATTGGCAGTATCAGCTGTATTCAGTGCAGCCCAATACATAGGAGAGAAACAAATCTCAGGCATGGATTGTTTTGTCCTAAAACTCACAGCAGACCAAAAAGACCTTGTTGAAAGAAGTGACAACACAGCAGAGATGATAAAACATTCAATATTTGGTTACTTTAGCCAAAAGAGTGGCCTATTAGTGCACTTAGAGGATTCATACCTAACAAGAATCCAATCACCAGGATCAAAACCTGTATATTGGGAAACAACAATGTCAACAAAGATTGATGATTATAGGAATGTGGAGGATGGTGTTATGATTGCACATTCTGGCTCATCAATTGTGATCATAACAAGGTTTGGTGATAACATTAAGGCTGGTTCAGAAATTACTAGGTTGGAAGAATCTTGGACTATTGATGATGTTGCTTTTAATGTTCAAGGGTTGTCTATGGATTGCTTCATTCCACCTCAGGAATTGGAAAAGGATAATTATGCATAA 1524 0.4593 MLCVFSMRGRSYSYSPSPPRRYSRRRRSPSPRGRYGGGRGRDLPTSLLVRNLHRDCRVEDLRAPFGHFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPAEMRARERRRDRSYSYDYRRSPPHSRSPRYARTYSRLTTSFALLSTNSLHHGSGQSHPETESIGGDHTPDHRLYREAPVVAGVTVGAQLTPGDEVVEAESSSAQYIIQHFTAATGCRKFEGTVKNVFTTGKVEMVVVDEVGSAATSGGGGVNGAIEKGCFVMWQMVPDKWQIELVLSGQKVIAGSNGAVAWRHTPWLGTHAAKGGVRPLRRALQGLDPLAVSAVFSAAQYIGEKQISGMDCFVLKLTADQKDLVERSDNTAEMIKHSIFGYFSQKSGLLVHLEDSYLTRIQSPGSKPVYWETTMSTKIDDYRNVEDGVMIAHSGSSIVIITRFGDNIKAGSEITRLEESWTIDDVAFNVQGLSMDCFIPPQELEKDNYA* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0504 507 PANTHER LIPASE 214 505 IPR006873 -
Aev02g0504 507 PANTHER GB|AAD30234.1 214 505 - -
Aev02g0504 507 SMART rrm1_1 46 119 IPR000504 GO:0003723
Aev02g0504 507 SUPERFAMILY RNA-binding domain, RBD 45 149 IPR035979 GO:0003676
Aev02g0504 507 MobiDBLite consensus disorder prediction 1 42 - -
Aev02g0504 507 Pfam Protein of unknown function (DUF620) 255 498 IPR006873 -
Aev02g0504 507 Gene3D - 41 155 IPR012677 -
Aev02g0504 507 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 123 IPR000504 GO:0003723
Aev02g0504 507 MobiDBLite consensus disorder prediction 126 152 - -
Aev02g0504 507 MobiDBLite consensus disorder prediction 175 199 - -
Aev02g0504 507 MobiDBLite consensus disorder prediction 126 157 - -
Aev02g0504 507 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47 116 IPR000504 GO:0003723
Aev02g0504 507 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0504 Aev-Chr2 3796883 3806431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0504 39 108 Eukaryotic Initiation Factors Gene Family AT3G11400 41.429 9.13e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0504 - - gmx:100801654 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0504 02 3796883 3806431 Aev02g0504 02 3796883 3806431 ECH
Aev06g0520 06 3720106 3723197 Aev02g0504 02 3796883 3806431 PCT