Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0502 ATGTCGGTTTCATCACCTACAACTAACGTAGATCTTGCTCCTGAGAAGATTGAAGATGAGAAATTGGAAGGTCCTATGTTGCATTGTGATAATTGTGACAGAGAAGTAGTTCATAAACTAGCTCAGATGTTCCTCCCTGCATTAGCCTCTGCTTGTGTTGATAACACAACAGGGCTACCCTTCAGGACTCCCGGTTCGGTCGCCGTGGATCTGAGAAAGGAATTGGTAGATTATCTCACACAAAGAAGTGAATCGTTTGTCGCCAAGTCTATTATCTCAGAAGGTGATCCGGAAGGTGAAGTGTTGGATCATCCTTTTGACATTGTTTCATATTTTGTTGATGAGTTTGTTAGTTTAAAGAGGAATCTTGCAAGCCAAGTCACCGGATGGCTGCTCAGTGAAAGGAGGGAGGACAAGATTGATGATTTCGTTCAGGAGATGGAAATGAATGGATTCTGGTCGCTCGATAAGAGAGAAGCGATCACGAGTACTCTGATCAAGAATGTTGATTTCAAGAACTCATATCATTGCAGCATGAGTTTCAATTCTGCAGAAGAACTTGCCAATCATGTTAATGCTTGCAACTTCAGAACCGTGGTCTGCGAAAACATGGGATGTAACACCAGATTCTGTGCATGTCATCTCGAAAAGCACGACTCAGAATGTCCTTTCAAGATAATTCCATGTGAACAGAAGTGTTCTGATAGCATTATGCGGCGCGATATGGATAGGCACTGCATAACTGTTTGTCCAATGAAAATTGTGAATTGTCCTTTCTATGGAGTTGGTTGTAGATCTGCTATTGCACAATGCATGATTGAGAAACATTTTTCAGATGATCTTCATTTACACTTATTTCACATGCTTAAAGGAATCCATAAGGAAGCATCTAGTGAAGATATTAACAGACAAGTGCAGAAAATTATGCAGGCATCATCAAACAGAAGGATAGCAGAGGCTAGGGATGTTAGAGGTTTCAAATCTATTGTTATGGATCTTGAAGCAAAGTTGGGGCCTTTGGAAGTGAGTTCCATGAAGAAAAATAGTGCAGAACCAGTTGCCAAGAATCAAGATAGTGAAGATAGTAGCACCAAAACAAATTGTGGAGAACTAAACATACTAGTTCCAAATTAA 1134 0.4039 MSVSSPTTNVDLAPEKIEDEKLEGPMLHCDNCDREVVHKLAQMFLPALASACVDNTTGLPFRTPGSVAVDLRKELVDYLTQRSESFVAKSIISEGDPEGEVLDHPFDIVSYFVDEFVSLKRNLASQVTGWLLSERREDKIDDFVQEMEMNGFWSLDKREAITSTLIKNVDFKNSYHCSMSFNSAEELANHVNACNFRTVVCENMGCNTRFCACHLEKHDSECPFKIIPCEQKCSDSIMRRDMDRHCITVCPMKIVNCPFYGVGCRSAIAQCMIEKHFSDDLHLHLFHMLKGIHKEASSEDINRQVQKIMQASSNRRIAEARDVRGFKSIVMDLEAKLGPLEVSSMKKNSAEPVAKNQDSEDSSTKTNCGELNILVPN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0502 377 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 5 351 IPR043211 -
Aev02g0502 377 SUPERFAMILY TRAF domain-like 199 280 - -
Aev02g0502 377 MobiDBLite consensus disorder prediction 349 371 - -
Aev02g0502 377 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 5 351 - -
Aev02g0502 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 280 IPR013083 -
Aev02g0502 377 Pfam TRAF-type zinc finger 218 276 IPR001293 GO:0008270
Aev02g0502 377 ProSiteProfiles Zinc finger TRAF-type profile. 218 265 IPR001293 GO:0008270
Aev02g0502 377 MobiDBLite consensus disorder prediction 346 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0502 Aev-Chr2 3775719 3778480 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g0502 zf-TRAF 3e-10 CL0389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0502 - - gmx:100799182 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0502 02 3775719 3778480 Aev02g0502 02 3775719 3778480 ECH
Aev06g0514 06 3677199 3680416 Aev02g0502 02 3775719 3778480 PCT