Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev02g0468 | ATGGAGGAGAGGAAGTTTGTGTGCAAGTATTGCAACAAGAGGTTCCCTTGTGGTAAGTCCCTTGGAGGACACATAAGGACCCACATGAGTAGTGATCATAATCATTCTTCATCAGCTCATGCCAATAATGATGAAAGAAGAAGAACCAACAATGTTGCTTCATCTGGTGGAGTGATAAAGTTTGATGGTGTGAGGAAGAGGAAGAGGGAATTTCTGGGGTGTGAAGATGATGTTGATGGTAGTGGGAATCAGAATAGCCTCATTTATGGGCTTAGAGAGAACCCCAAGAAAACAATGAGGTTTGTGCATTCCAATGCACCTTTGAAACTTGACAAGTTTTGCAAAGAATGTGGGAAAGGTTTTCCATCACTTAAGGCTCTCTGTGGTCACATGGCTTGTCACTCAGAAAAGGAGAAACCAACCAACAATAACAACAACAATAGCAGCAACAATAACAGGTTTGATAATTATAATAATGATTATTATTATAATTATAATTATGATAGCAATAATAACAATTCTTCTGGGATCAGTGAGAAGCAGAAATTGGTTATGGATAGTCAATCTGATACTGAAACTTCAGCTCCAAGGAGATCTAAGAGGATGATGAGGTTCAAGACTATCAGTAACAGCAAAAACAAGTCTTGTTCTTCTGCTGCTGCTACTTTGGGAAATGGTTCTTCTTCTGTTTCAGAGGTTGAGCAGGAGCAAGAAGAGGTTGCAAGGTGCTTGATGATGCTTTCCAAGGATAATAGCTACCACTACAAGGCTCGTTTTGCTCTGTTCACTGAGTCTTCTGATAACAATTCGGTTGTTCTTGAGGCGAAATCGAAGTCGAAATCGCCTTCTGTTGACACCAAGTTTGCTTCTGCTGCTGCTGCTATCAGCAATGGTAAGGTTAAGGATTATGTGTCTAATGGTTATGGGGTTGTTGATAAGAAGATGAAGAAGTTGAAGTATGATGAGGTTGATTATGATTCTGATAATTCAGATTCAGGGTATTTCAGATATGGTCCTAAGAAAGTTGACTCTGATGATTCAAGTGAAGAAGTTAAGCCGTCAAGGAAGAAAGATTTCGGGGATTTTGATGGTGAATCGAGGAAGATAATTCTGAGCAGAGAAGGTGGAAGAAGCAGGAACACTGTGTTGAAGAAAGCAGTTTTGGATGATTCTTCTGCAAGTAGGAAAAAACAGAACTATGATGAGTCATTTGGGATTTCTAGCAAGAAGAAATCGAAGAATCTGAATGGGTTTGTGAATGGTAAAGTTTTGAAGTATGAGTTCTTGATAAGTGAAAGGGACAACAAGAACAATAACAATGGCGGCTCTGATTATGATTCAGAATATGAGAGTGATGAGAACAGTACAGATACAGAGTCATACCCTGCTCAAAAGGCTCAATCTAACAGCAAGAACATCAAATCAGGGAAGGCCAAGAAGAAGAAGAAATCGAAGTTGAAGTTGAAGAAGAGCAAGGAACATGAGTGCCCAATATGCAACAAGATTTTCAGGTCAGGGCAAGCATTGGGGGGTCACAAAAGGTCCCATTTTGTTGGAGGGTCAGAAGAGAACACATTGGTCATAAGAACAAGTGCTCCTAATCATAATCCTAATCCTAATCCTAATCCTGTTCTTGTTCCTTGCCTAATTGATCTCAATCTACCTGCTCCTGTTGATGAATAG | 1683 | 0.3981 | MEERKFVCKYCNKRFPCGKSLGGHIRTHMSSDHNHSSSAHANNDERRRTNNVASSGGVIKFDGVRKRKREFLGCEDDVDGSGNQNSLIYGLRENPKKTMRFVHSNAPLKLDKFCKECGKGFPSLKALCGHMACHSEKEKPTNNNNNNSSNNNRFDNYNNDYYYNYNYDSNNNNSSGISEKQKLVMDSQSDTETSAPRRSKRMMRFKTISNSKNKSCSSAAATLGNGSSSVSEVEQEQEEVARCLMMLSKDNSYHYKARFALFTESSDNNSVVLEAKSKSKSPSVDTKFASAAAAISNGKVKDYVSNGYGVVDKKMKKLKYDEVDYDSDNSDSGYFRYGPKKVDSDDSSEEVKPSRKKDFGDFDGESRKIILSREGGRSRNTVLKKAVLDDSSASRKKQNYDESFGISSKKKSKNLNGFVNGKVLKYEFLISERDNKNNNNGGSDYDSEYESDENSTDTESYPAQKAQSNSKNIKSGKAKKKKKSKLKLKKSKEHECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRTSAPNHNPNPNPNPVLVPCLIDLNLPAPVDE* | 561 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev02g0468 | 560 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 114 | 134 | IPR013087 | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 456 | 473 | - | - | |
Aev02g0468 | 560 | SUPERFAMILY | beta-beta-alpha zinc fingers | 2 | 31 | IPR036236 | - | |
Aev02g0468 | 560 | SUPERFAMILY | beta-beta-alpha zinc fingers | 113 | 516 | IPR036236 | - | |
Aev02g0468 | 560 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 6 | 33 | IPR013087 | - | |
Aev02g0468 | 560 | SMART | c2h2final6 | 6 | 28 | IPR013087 | - | |
Aev02g0468 | 560 | SMART | c2h2final6 | 494 | 516 | IPR013087 | - | |
Aev02g0468 | 560 | SMART | c2h2final6 | 112 | 134 | IPR013087 | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 28 | 52 | - | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 338 | 359 | - | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 28 | 47 | - | - | |
Aev02g0468 | 560 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 496 | 516 | IPR013087 | - | |
Aev02g0468 | 560 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 112 | 139 | IPR013087 | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 174 | 192 | - | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 334 | 359 | - | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 433 | 489 | - | - | |
Aev02g0468 | 560 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 8 | 28 | IPR013087 | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 474 | 489 | - | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 174 | 200 | - | - | |
Aev02g0468 | 560 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 1 | 560 | - | - | |
Aev02g0468 | 560 | Gene3D | Classic Zinc Finger | 1 | 58 | - | - | |
Aev02g0468 | 560 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 494 | 516 | IPR013087 | - | |
Aev02g0468 | 560 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 1 | 560 | - | - | |
Aev02g0468 | 560 | Pfam | C2H2-type zinc finger | 494 | 516 | - | - | |
Aev02g0468 | 560 | Pfam | C2H2-type zinc finger | 114 | 136 | - | - | |
Aev02g0468 | 560 | Pfam | C2H2-type zinc finger | 6 | 30 | - | - | |
Aev02g0468 | 560 | MobiDBLite | consensus disorder prediction | 386 | 406 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev02g0468 | Aev-Chr2 | 3529308 | 3530990 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev02g0468 | 1 | 560 | C2H2 Transcription Factor Family | AT1G26610 | 35.666 | 1.08e-81 | 261 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev02g0468 | zf-C2H2_6 | 4.1e-07 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev02g0468 | - | - | gmx:100805520 | 478.404 |