Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0468 ATGGAGGAGAGGAAGTTTGTGTGCAAGTATTGCAACAAGAGGTTCCCTTGTGGTAAGTCCCTTGGAGGACACATAAGGACCCACATGAGTAGTGATCATAATCATTCTTCATCAGCTCATGCCAATAATGATGAAAGAAGAAGAACCAACAATGTTGCTTCATCTGGTGGAGTGATAAAGTTTGATGGTGTGAGGAAGAGGAAGAGGGAATTTCTGGGGTGTGAAGATGATGTTGATGGTAGTGGGAATCAGAATAGCCTCATTTATGGGCTTAGAGAGAACCCCAAGAAAACAATGAGGTTTGTGCATTCCAATGCACCTTTGAAACTTGACAAGTTTTGCAAAGAATGTGGGAAAGGTTTTCCATCACTTAAGGCTCTCTGTGGTCACATGGCTTGTCACTCAGAAAAGGAGAAACCAACCAACAATAACAACAACAATAGCAGCAACAATAACAGGTTTGATAATTATAATAATGATTATTATTATAATTATAATTATGATAGCAATAATAACAATTCTTCTGGGATCAGTGAGAAGCAGAAATTGGTTATGGATAGTCAATCTGATACTGAAACTTCAGCTCCAAGGAGATCTAAGAGGATGATGAGGTTCAAGACTATCAGTAACAGCAAAAACAAGTCTTGTTCTTCTGCTGCTGCTACTTTGGGAAATGGTTCTTCTTCTGTTTCAGAGGTTGAGCAGGAGCAAGAAGAGGTTGCAAGGTGCTTGATGATGCTTTCCAAGGATAATAGCTACCACTACAAGGCTCGTTTTGCTCTGTTCACTGAGTCTTCTGATAACAATTCGGTTGTTCTTGAGGCGAAATCGAAGTCGAAATCGCCTTCTGTTGACACCAAGTTTGCTTCTGCTGCTGCTGCTATCAGCAATGGTAAGGTTAAGGATTATGTGTCTAATGGTTATGGGGTTGTTGATAAGAAGATGAAGAAGTTGAAGTATGATGAGGTTGATTATGATTCTGATAATTCAGATTCAGGGTATTTCAGATATGGTCCTAAGAAAGTTGACTCTGATGATTCAAGTGAAGAAGTTAAGCCGTCAAGGAAGAAAGATTTCGGGGATTTTGATGGTGAATCGAGGAAGATAATTCTGAGCAGAGAAGGTGGAAGAAGCAGGAACACTGTGTTGAAGAAAGCAGTTTTGGATGATTCTTCTGCAAGTAGGAAAAAACAGAACTATGATGAGTCATTTGGGATTTCTAGCAAGAAGAAATCGAAGAATCTGAATGGGTTTGTGAATGGTAAAGTTTTGAAGTATGAGTTCTTGATAAGTGAAAGGGACAACAAGAACAATAACAATGGCGGCTCTGATTATGATTCAGAATATGAGAGTGATGAGAACAGTACAGATACAGAGTCATACCCTGCTCAAAAGGCTCAATCTAACAGCAAGAACATCAAATCAGGGAAGGCCAAGAAGAAGAAGAAATCGAAGTTGAAGTTGAAGAAGAGCAAGGAACATGAGTGCCCAATATGCAACAAGATTTTCAGGTCAGGGCAAGCATTGGGGGGTCACAAAAGGTCCCATTTTGTTGGAGGGTCAGAAGAGAACACATTGGTCATAAGAACAAGTGCTCCTAATCATAATCCTAATCCTAATCCTAATCCTGTTCTTGTTCCTTGCCTAATTGATCTCAATCTACCTGCTCCTGTTGATGAATAG 1683 0.3981 MEERKFVCKYCNKRFPCGKSLGGHIRTHMSSDHNHSSSAHANNDERRRTNNVASSGGVIKFDGVRKRKREFLGCEDDVDGSGNQNSLIYGLRENPKKTMRFVHSNAPLKLDKFCKECGKGFPSLKALCGHMACHSEKEKPTNNNNNNSSNNNRFDNYNNDYYYNYNYDSNNNNSSGISEKQKLVMDSQSDTETSAPRRSKRMMRFKTISNSKNKSCSSAAATLGNGSSSVSEVEQEQEEVARCLMMLSKDNSYHYKARFALFTESSDNNSVVLEAKSKSKSPSVDTKFASAAAAISNGKVKDYVSNGYGVVDKKMKKLKYDEVDYDSDNSDSGYFRYGPKKVDSDDSSEEVKPSRKKDFGDFDGESRKIILSREGGRSRNTVLKKAVLDDSSASRKKQNYDESFGISSKKKSKNLNGFVNGKVLKYEFLISERDNKNNNNGGSDYDSEYESDENSTDTESYPAQKAQSNSKNIKSGKAKKKKKSKLKLKKSKEHECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRTSAPNHNPNPNPNPVLVPCLIDLNLPAPVDE* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0468 560 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
Aev02g0468 560 MobiDBLite consensus disorder prediction 456 473 - -
Aev02g0468 560 SUPERFAMILY beta-beta-alpha zinc fingers 2 31 IPR036236 -
Aev02g0468 560 SUPERFAMILY beta-beta-alpha zinc fingers 113 516 IPR036236 -
Aev02g0468 560 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Aev02g0468 560 SMART c2h2final6 6 28 IPR013087 -
Aev02g0468 560 SMART c2h2final6 494 516 IPR013087 -
Aev02g0468 560 SMART c2h2final6 112 134 IPR013087 -
Aev02g0468 560 MobiDBLite consensus disorder prediction 28 52 - -
Aev02g0468 560 MobiDBLite consensus disorder prediction 338 359 - -
Aev02g0468 560 MobiDBLite consensus disorder prediction 28 47 - -
Aev02g0468 560 ProSitePatterns Zinc finger C2H2 type domain signature. 496 516 IPR013087 -
Aev02g0468 560 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Aev02g0468 560 MobiDBLite consensus disorder prediction 174 192 - -
Aev02g0468 560 MobiDBLite consensus disorder prediction 334 359 - -
Aev02g0468 560 MobiDBLite consensus disorder prediction 433 489 - -
Aev02g0468 560 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Aev02g0468 560 MobiDBLite consensus disorder prediction 474 489 - -
Aev02g0468 560 MobiDBLite consensus disorder prediction 174 200 - -
Aev02g0468 560 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 560 - -
Aev02g0468 560 Gene3D Classic Zinc Finger 1 58 - -
Aev02g0468 560 ProSiteProfiles Zinc finger C2H2 type domain profile. 494 516 IPR013087 -
Aev02g0468 560 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 560 - -
Aev02g0468 560 Pfam C2H2-type zinc finger 494 516 - -
Aev02g0468 560 Pfam C2H2-type zinc finger 114 136 - -
Aev02g0468 560 Pfam C2H2-type zinc finger 6 30 - -
Aev02g0468 560 MobiDBLite consensus disorder prediction 386 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0468 Aev-Chr2 3529308 3530990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0468 1 560 C2H2 Transcription Factor Family AT1G26610 35.666 1.08e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev02g0468 zf-C2H2_6 4.1e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0468 - - gmx:100805520 478.404