Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0441 ATGGAGGTTTCAGAGAAGGAAGGCAAGACTGGAAGTCACGCGACATCAGCAGCAGCCTTTGTGGAAGGGGGAATTCAAGAAGCGTGCCATGATGCTTGTAGTATATGCCTTGAGGATTTTATTGAAAGTGATCCTGCGACGGTCACCAATTGCAAGCATGAGTATCATCTGCAGTGCATTCTTGAATGGTGTCAGAGAAGCTCCCAATGTCCAATGTGTTGGCAATCGATTAGCTTGAAGGATGCGACCAGTCAAGAATTGCTCGAGGCCGTAGAGCAGGAGAGGAGCTTGAGGGCTACTCCATCAAGAAATGCAGCTATTTTTCATCATCCTATCCTTGGTGGTTTTGAATTGCAGCATTTACCGGGCGGTGTAAATGATGCTGATTTCGAAGAGCGGATAATTCAACATTTAGCTGCTGCAGCGGCGATGAGGAGAGCGCGCCACCTTGGTCGGAGGGAAGGTCATAGAACTAGGTCATCTTCTCATGGCCACACTCAGTTCCTACTGTACTCAACTCAGCCGAGTGCACATCCATCACGTCCTGATTCAGCTGCTGGAGAAGGAAATGAACCCGCTGCAATTCCTGTCGGAAGTCCATCTACTCCACTCATGTCTGACGGAGATGAACCATTACCATTGCAGCGGATTCCACATTTTCATGCTCAGAGCTCGTCTTCATTAGCTCCTGGTTCCACGGTCTCGGCAACAGACCGACAAGGGATTCACTCTGATGATAGAGGTTCTACAACCCGTTCTTCGACTGCAAACCAAGATGGAGCAGGGCCATCAGAATTCCAGTCATTTTCTGATTCTCTGCGGTCCAAATTTAACGCAATGTCGGTGAGATACAAGGAGTCGATTTCAAAGGGCACGAGGGGGTGGAAGGAGAGGCTATTCTCTCGAAACTCTTCCATGTCAGAATTTGGTTCAGAAGTGAAGAGAGAGTTGAATGCCGGAATTGCTAGTGTATCCCGATTGATGGAACGCCTTGAAAATAGAGAAAATAATGGGGCCAGTGGTGCTTCTTTGTCAAATCAAATGGCAGATTCTTCCATCCCGGGGACGAGCAACCGTCACAATGTGGAACCTCTTCAAAGGAACAGTCCAGCTTCTTTTTCTGCTAGCTCAGATTCAAATTGA 1143 0.4794 MEVSEKEGKTGSHATSAAAFVEGGIQEACHDACSICLEDFIESDPATVTNCKHEYHLQCILEWCQRSSQCPMCWQSISLKDATSQELLEAVEQERSLRATPSRNAAIFHHPILGGFELQHLPGGVNDADFEERIIQHLAAAAAMRRARHLGRREGHRTRSSSHGHTQFLLYSTQPSAHPSRPDSAAGEGNEPAAIPVGSPSTPLMSDGDEPLPLQRIPHFHAQSSSSLAPGSTVSATDRQGIHSDDRGSTTRSSTANQDGAGPSEFQSFSDSLRSKFNAMSVRYKESISKGTRGWKERLFSRNSSMSEFGSEVKRELNAGIASVSRLMERLENRENNGASGASLSNQMADSSIPGTSNRHNVEPLQRNSPASFSASSDSN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0441 380 MobiDBLite consensus disorder prediction 146 269 - -
Aev02g0441 380 Pfam Ring finger domain 32 73 IPR001841 -
Aev02g0441 380 SMART ring_2 33 73 IPR001841 -
Aev02g0441 380 MobiDBLite consensus disorder prediction 247 269 - -
Aev02g0441 380 MobiDBLite consensus disorder prediction 336 380 - -
Aev02g0441 380 ProSiteProfiles Zinc finger RING-type profile. 33 73 IPR001841 -
Aev02g0441 380 MobiDBLite consensus disorder prediction 162 180 - -
Aev02g0441 380 Coils Coil 314 334 - -
Aev02g0441 380 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 9 366 - -
Aev02g0441 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 84 IPR013083 -
Aev02g0441 380 SUPERFAMILY RING/U-box 27 80 - -
Aev02g0441 380 MobiDBLite consensus disorder prediction 332 380 - -
Aev02g0441 380 MobiDBLite consensus disorder prediction 219 239 - -
Aev02g0441 380 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 9 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0441 Aev-Chr2 3301662 3304506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0441 31 81 C3H Transcription Factor Family AT4G00335 45.098 2.83e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0441 K19043 - gmx:100803582 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0488 06 3531556 3535309 Aev02g0441 02 3301662 3304506 PCT