Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0420 ATGAAATCATCATCAATGGACCCAAAAGGTGCACAAGGATGCCATCTACCACCATCTTTTCTCACTAGAGACCTTAACTTACACCCTCACTATCAACAACCACACCAAAACCTCAACACCATCACTACCAACAACCAAAACACTAAGGATCATCAATTAGACAAAAAATGTGGCAAAAAAAGAGAGCGCGAGGAACAAAACGTCGCTAATCATCCTTTTGGTGGTAGTAGAGAGGGTAAGGAGCCTCTCTTCATCGACACAAAAGGAGATTCCGGCGAGATCGCAAAGCGTCCTAGGGGGAGACCACCAGGGTCCAAGAACAAGCCAAAATTACCCACCATCATCACAAGGGACCATGCAAATGCTCTAAGATCTAATGTCATGGAAGTTGCGAATGGTTGTGACATCAAGGAGAGTGTCATAACCTTCATGCAACAACACCAATGTGGCGTTTGCATCCTCAGTGGGAATGGTTCAGTCACTAATGTTACCCTCCGGCAGCCGACTTCACCGGGTGCCGTGCTAACCCTACATGGTAGGTTTGAGATTTTGTCCTTGTCGGGGTTCTTCTTGCCACCGTCAGCTCCATTGGTTGCATCAGGATTGGCCATTTACTTGTCTGGTGGACAAGGACAAGTAGTTGGAGGGAGCGTGGTGGGACCACTTTTGGCCGTCGGTACGGTCTTGATCATGGCCGCGTCATTTAGTAATGCAACTTATGAGAGGCTTCCGTTGGAGGAGGGGGAAGAGTAG 753 0.4807 MKSSSMDPKGAQGCHLPPSFLTRDLNLHPHYQQPHQNLNTITTNNQNTKDHQLDKKCGKKREREEQNVANHPFGGSREGKEPLFIDTKGDSGEIAKRPRGRPPGSKNKPKLPTIITRDHANALRSNVMEVANGCDIKESVITFMQQHQCGVCILSGNGSVTNVTLRQPTSPGAVLTLHGRFEILSLSGFFLPPSAPLVASGLAIYLSGGQGQVVGGSVVGPLLAVGTVLIMAASFSNATYERLPLEEGEE* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0420 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 237 IPR005175 -
Aev02g0420 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 11 249 - -
Aev02g0420 250 CDD DUF296 127 194 IPR005175 -
Aev02g0420 250 MobiDBLite consensus disorder prediction 29 48 - -
Aev02g0420 250 MobiDBLite consensus disorder prediction 49 68 - -
Aev02g0420 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 249 IPR014476 GO:0003680
Aev02g0420 250 MobiDBLite consensus disorder prediction 81 100 - -
Aev02g0420 250 PIRSF ESCAROLA 28 250 IPR014476 GO:0003680
Aev02g0420 250 MobiDBLite consensus disorder prediction 1 112 - -
Aev02g0420 250 ProSiteProfiles PPC domain profile profile. 120 250 IPR005175 -
Aev02g0420 250 Gene3D - 124 249 - -
Aev02g0420 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0420 Aev-Chr2 3124871 3125623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0420 18 240 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 52.466 3.66e-64 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0420 - - gmx:100816243 279.641