Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0376 ATGGGAAGAGGGAGAGTGGAGCTGAAGAGGATAGAGAACAAGATCAACCGGCAAGTGACTTTCTCAAAAAGAAGAAATGGTTTGCTAAAGAAAGCTTATGAATTATCTGTTCTCTGTGATGCTGAGGTTGCTCTTATCATTTTCTCTAGCAGAGGAAAACTCTATGAATTCGGAAGTGCAGGCATCAACAAAACTATTGAACGATATCAAAGGTGCTCCTTTACTCCTCAAGATGACCATGTTGAATGTGAAACTCAGAGCTGGTACCAGGAGGTGTCAAAGCTAAAGGCAAAGTATGAGTCTCTCCAAAGGACTCAAAGGCATTTGCTTGGGGAAGATCTTGGACCGCTGACAATAACGGAGCTACAGAATCTTGAGAAACAGCTTGAAGAGGCTTTAGCACAAGCCAGGCAAAGGAAGACACAAATTATGATTGAACAAATGGAAGAGCTTCGCAGGAGGGAACGCCATCTTGGAGATATGAATAAGCAACTTAGGCTCAAGCTAGAAGCAGAAGGATTCAATCTTAAAGCTATGGAAAGTTTGTGGAGTTCAACTTCAGCTGCTGCTAACAATGGCTTTGCCTTTCAGCCAATTACTCAAACCAATCCTATGGATTGCCAAACAGAACCTTTCTTGCAAATAGGGTACCATCACTATGTTCAACCTGATGAGGCATCCAATAGTGTTGCTAAGAGCATGGCTTGTGAGACTAACTTCATGCATGGATGGGTCCTTTGA 741 0.4265 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTIERYQRCSFTPQDDHVECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLTITELQNLEKQLEEALAQARQRKTQIMIEQMEELRRRERHLGDMNKQLRLKLEAEGFNLKAMESLWSSTSAAANNGFAFQPITQTNPMDCQTEPFLQIGYHHYVQPDEASNSVAKSMACETNFMHGWVL* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0376 246 ProSiteProfiles K-box domain profile. 85 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev02g0376 246 PANTHER MADS BOX PROTEIN 1 231 - -
Aev02g0376 246 SUPERFAMILY SRF-like 2 81 IPR036879 GO:0003677|GO:0046983
Aev02g0376 246 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev02g0376 246 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev02g0376 246 Coils Coil 119 146 - -
Aev02g0376 246 Coils Coil 148 168 - -
Aev02g0376 246 CDD MADS_MEF2_like 2 73 IPR033896 GO:0000977|GO:0045944
Aev02g0376 246 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Aev02g0376 246 Gene3D - 13 80 IPR036879 GO:0003677|GO:0046983
Aev02g0376 246 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev02g0376 246 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev02g0376 246 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev02g0376 246 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev02g0376 246 PANTHER MADS-BOX TRANSCRIPTION FACTOR 17 1 231 - -
Aev02g0376 246 Pfam K-box region 84 169 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0376 Aev-Chr2 2763029 2769592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0376 1 246 MADS-box Gene Family AT2G45650 63.922 1.14e-110 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev02g0376 K-box 3.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0376 K09264 - gmx:100820061 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0376 02 2763029 2769592 Aev02g0376 02 2763029 2769592 ECH
Aev02g0376 02 2763029 2769592 Aev05g2983 05 30498378 30503614 PCT