Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0375 ATGGTGAGAGGAAAAACAGAGATGAAGAGAATAGAGAATGCGACAAGCAGGCAAGTAACATTCTCAAAGAGGCGAAATGGTTTGCTGAAAAAGGCGTTTGAGCTCTCAGTTCTTTGTGATGCTCAAGTTGCTCTTATCATCTTCTCTCCTAGGGGCAAACTTTATGAATTTGCAAGCTCCAGCATGCAGGAGACAATTGAAAGATATCGCAAGCATACCAGGGATATTCCAACTGCACCCAAAATAGTTGAAAATAATATGCAGAATCTGAAGCAAGAAGCAGCAAGCATGATGAAGAAGATTGAGACTCTTGAAGCCTCAAAAAGGAAACTATTGGGGGAAGGATTGGGGTCATGCTCCATTGATGAACTTCAACAAATAGAACAACAGTTGGAAAGGAGTGTAAGAAATGTTAGAGCAAGAAAGGCTCAGGTTTACAAGGAACAAATTGAAGAACTAAAGAAAAAGGAAAAAGCCCTAGTTGCTGAAAATGCTAGGCTCTCTGAAAAGTATGGTAATAATAACCCTATTCCAGAGGCAGAGGAAGAGAGGCAGAAGCAGACTAGTACTCAACAAGTGTATGCAGAAAGTAGTAGTCCAAGTTCTGATGTTGAAACTGAATTGTTCATTGGCCTTCCTGAAACAAGATTAAGGCGTATTTCTCCTCCTAATTAA 675 0.4015 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAQVALIIFSPRGKLYEFASSSMQETIERYRKHTRDIPTAPKIVENNMQNLKQEAASMMKKIETLEASKRKLLGEGLGSCSIDELQQIEQQLERSVRNVRARKAQVYKEQIEELKKKEKALVAENARLSEKYGNNNPIPEAEEERQKQTSTQQVYAESSSPSSDVETELFIGLPETRLRRISPPN* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0375 224 MobiDBLite consensus disorder prediction 166 210 - -
Aev02g0375 224 Gene3D - 14 100 IPR036879 GO:0003677|GO:0046983
Aev02g0375 224 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev02g0375 224 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev02g0375 224 Coils Coil 121 170 - -
Aev02g0375 224 PANTHER MADS-BOX PROTEIN SOC1 1 214 - -
Aev02g0375 224 Pfam K-box region 85 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev02g0375 224 PANTHER MADS BOX PROTEIN 1 214 - -
Aev02g0375 224 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev02g0375 224 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev02g0375 224 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev02g0375 224 Coils Coil 87 114 - -
Aev02g0375 224 CDD MADS_MEF2_like 3 75 IPR033896 GO:0000977|GO:0045944
Aev02g0375 224 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev02g0375 224 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Aev02g0375 224 MobiDBLite consensus disorder prediction 187 205 - -
Aev02g0375 224 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev02g0375 224 SUPERFAMILY SRF-like 3 73 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0375 Aev-Chr2 2752698 2761218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0375 1 158 MADS-box Gene Family AT2G45660 77.848 4.46e-88 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev02g0375 K-box 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0375 - - mtr:MTR_8g033220 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0375 02 2752698 2761218 Aev02g0375 02 2752698 2761218 ECH
Aev06g3172 06 33244198 33253230 Aev02g0375 02 2752698 2761218 PCT