Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0358 ATGAAGCCTGTGTTTTGCGGAAACCTAGATTTCGACGCTCGACAATCCGATGTTGAGAGGCTCTTCAGAAGATACGGGAAGGTTGATAGAGTGGACATAAAATCTGGTTTTGCTTTTGTTTACATGGAAGATGAACGTGATGCTGAGTATGCCATCAGAAGACTTGATAGAACAGAATTTGGTAGAAAGGGGCGTCGTATACGTGTTGAGTGGTCAAAGCAAGAACGGGACAATAGAAGGTCAGGGGGGGATTCAAGAAAATCCTCAACTAATTCAAGACCATCGAAGACTTTATTTATCATAAATTTTGATCCAGTTCACACAAGGTCGAGGGATCTGGAGAAACACTTTGATTCCTATGGGAAAATATCAAACATAAGGATCAGAAGGAATTTTGCTTTTATCCAGTATGAAACCCAGGAGGATGCTACTAGAGCTTTGGAAGCAACAAACTTGAGCAAGTTTATGGATCGTGTTATCACAGTGGAGTATGCTATAAGAGATGATGATGATGACAGAAGGAATGGACGCAGTCCTGATAGAAGAGGCCATGACTCGCCTGATGGGAGATATGGTCGTGGCAGATCCCCGAGTCCGTATCGCAGAGGTAGGGGCAGCCCAGATTATGGTCATGGATCAAATCCAGCTTCTAGACCAGAACCAAGAGGAAGCCCCAAGTATGAACGAGATGAAAGCCCAGTAAATGGAAGATATGACAGCCGGTCTCCCCCACCACGGGATAGGTCACGATCGCGATCCCAAGGCGAAATTTGA 774 0.4496 MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDIKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWSKQERDNRRSGGDSRKSSTNSRPSKTLFIINFDPVHTRSRDLEKHFDSYGKISNIRIRRNFAFIQYETQEDATRALEATNLSKFMDRVITVEYAIRDDDDDRRNGRSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPASRPEPRGSPKYERDESPVNGRYDSRSPPPRDRSRSRSQGEI* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0358 257 SUPERFAMILY RNA-binding domain, RBD 4 169 IPR035979 GO:0003676
Aev02g0358 257 PANTHER - 4 213 - -
Aev02g0358 257 MobiDBLite consensus disorder prediction 73 93 - -
Aev02g0358 257 MobiDBLite consensus disorder prediction 169 257 - -
Aev02g0358 257 MobiDBLite consensus disorder prediction 222 257 - -
Aev02g0358 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 74 IPR000504 GO:0003723
Aev02g0358 257 MobiDBLite consensus disorder prediction 169 191 - -
Aev02g0358 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 96 167 IPR000504 GO:0003723
Aev02g0358 257 Gene3D - 1 85 IPR012677 -
Aev02g0358 257 Gene3D - 86 180 IPR012677 -
Aev02g0358 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 63 IPR000504 GO:0003723
Aev02g0358 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 98 160 IPR000504 GO:0003723
Aev02g0358 257 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 4 213 - -
Aev02g0358 257 SMART rrm1_1 3 70 IPR000504 GO:0003723
Aev02g0358 257 SMART rrm1_1 97 163 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0358 Aev-Chr2 2611785 2614590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0358 4 162 Eukaryotic Initiation Factors Gene Family AT4G34110 25.287 8.40e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0358 K12893 - gmx:100797778 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0358 02 2611785 2614590 Aev02g0358 02 2611785 2614590 ECH