Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0348 ATGAAGATCAGAGTGGAAAAAGTGGCTTCTTTGATGAGTTTTGGAGGGTTTCTAGACAACAACTCAGGTGGTGGTGGTGGCGGCGGCGGCGGCGGTGGTTTCAGAAATATAGCAGAAATTCCATACATCAACGGTGGTGCCACCACCAATAACAATCACAGCAACAACAACAACATAGATAGAACAATGCCCTCTGGTGCAATCTCACAGCCTCGCCTTATGACTCCAACTTTGGCCAAATCCATGTTCAACTCATCACCTGGCCTCTCTCTAGCACTTCAAACAAATGTTGATGGACAAAGTGAAGTGAATAACAGAATGGCAGAGAATAATTTTGAGTCAAGTAATGGTTTGAGAAGGAGCAGAGAAGAAGAACATGAAAGCAGATCTGGTAGTGATAACATGGATGGTGTTTCAGGTGATGAACAAGATGCTGCCGACAAACCTCCAAGAAAAAAGAGATATCACCGACACACTCCTCAGCAAATACAAGAGCTTGAATCGTTGTTTAAGGAGTGTCCTCATCCAGATGAGAAGCAAAGACTTGAACTAAGCAAGAGGCTTTGCTTGGAAACAAGGCAAGTGAAGTTTTGGTTCCAAAATCGGAGAACACAAATGAAGACTCAATTGGAGCGCCATGAGAATACACTTCTAAGGCAAGAGAATGACAAACTCAGAGCAGAGAACATGTCAATAAGGGATGCAATGAGGAACCCCATGTGCTCAAATTGTGGTGGTCCTGCCATAATTGGTGAGATCTCAATTGAGGAACAGCATCTTAGGATTGAGAATGCAAGGTTGAAGGATGAACTAGACAGAGTCTGTGGACTTGCTGGGAAATTCTTGGGCCGCCCCATTTCGTCGTTGAACGGCTCAATTGCTCATCATCATCATCCTCCATTGCCAAACTCAAGCTTGGAGCTTGGTGTTGGAACAAACAACAACAATGGATTTGTTGGGTTGAGCAATGTGCATTGTAATAGTAATAATGGAACAACATTGACCCCTTTAGGCCCTGATTTTGGGGTTGGTTTGTCTTCTAGTCCTTTGGCTATGGTATCTCCAACAACACATAATCCTCAAACTAGGCCAAGTAATAATAATGTTGTGGTGAGTGGTGGATTTGAGAGGTCAATGTTCTTGGAGCTTGCTTTGGCTGCAATGGATGAATTGGTTAAGATGGCACAAAGTGGTGAACCTCTTTGGATTAGGAGTTTGGAGATTGGAAGAGAAGTGTTGAACCATGAGGAGTATTTGAGGACATTTACCACTCCTTGTGTTGGTATGAGACCCAATGGTTTTGTCTCTGAGGCTTCTAGGGAAAGTGGCATGGTCATCATAAACAGCTTGGCACTTGTTGAAACTCTAATGGACTCAAATCGGTGGGCAGATATGTTTCCTTGTATGATTGCAAGAACATCCACCACTGAAGTAATATCTAATGGAATAAATGGAACAAGAAATGGTGCACTTCAACTTATGCATGCTGAGCTACAAGTGCTATCACCATTGGTGCCAGTGAGAGAGGTGAATTTTCTGAGGTTTTGTAAGCAACATGCTGAAGGAGTGTGGGCTGTGGTAGATGTGTCCATTGATGCCATCAGATCAGAAGCTTCTTCACCCACTTTTCTCAACTCTAGGAGGCTCCCTTCTGGTTGTGTTGTTCAAGATATGCCTAATGGTTACTCCAAGGTGACGTGGGTGGAACACGCAGAATATGAGGAAAGTGAAGTGCACGAACTATACAGAGGTTTGTTAAGTTCAGGAATGGGGTTCGGTGCACAACGATGGCTCGCCACTCTTCAACGCCAATGTGAGTGCCTCGCCATTCTTATGTCCTCCGCGCCACCCTCTAGAGACCACTCAGCAATAACCGCAGGTGGTCGACGCAGCATGTTGAAGCTAGCGCAACGCATGACCAACAACTTCTGTGCCGGAGTGTGCGCCTCAACGGTGCACAAGTGGAACAAGCTCAACAACGCGGCCAACGGCGTCGACGAGGACATCAGGGTAATGACTAGGAAGAGTGTGGACGACCCCGGTGAACCTCCAGGGATCGTTCTCAGTGCCGCCACATCAGTTTGGCTCCCAGTCTCGCCGCAAAGATTGTTTGACTTCCTCCGCGACGAGAGGCTGAGGAGCGAGTGGGACATATTATCAAATGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGTCAGGACCATGGAAATTGCGTCTCTCTCCTTAGAGCCAGTGCAATGAATTCGAATCAGAGCAGCATGTTGATACTGCAGGAGACATGCATAGACGAGGCGGGGTCGCTTGTGGTGTACGCGCCAGTTGATATTCCAGCCATGCACGTCGTGATGAACGGTGGTGATTCTGCTTACGTGGCACTTCTTCCTTCCGGCTTCGCTATTGTACCTGACGGGGTCATCTCTCGTGGGCCCCAAAACGGTCCTGCCACTATTAACGGCACCGATAACGCCGTTGGGCCACGTGGTGGTGGGTCCCTTCTAACGGTGGCGTTTCAGATCCTCGTGAATAGTCTCCCGACGGCAAAACTAACGGTGGAATCTGTGGAGACCGTTAACAATCTCATCTCTTGCACTGTTCAGAAGATTAAAGCAGCACTTCAATGTGAAGTAAGCTCATGA 2643 0.4726 MKIRVEKVASLMSFGGFLDNNSGGGGGGGGGGGFRNIAEIPYINGGATTNNNHSNNNNIDRTMPSGAISQPRLMTPTLAKSMFNSSPGLSLALQTNVDGQSEVNNRMAENNFESSNGLRRSREEEHESRSGSDNMDGVSGDEQDAADKPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISIEEQHLRIENARLKDELDRVCGLAGKFLGRPISSLNGSIAHHHHPPLPNSSLELGVGTNNNNGFVGLSNVHCNSNNGTTLTPLGPDFGVGLSSSPLAMVSPTTHNPQTRPSNNNVVVSGGFERSMFLELALAAMDELVKMAQSGEPLWIRSLEIGREVLNHEEYLRTFTTPCVGMRPNGFVSEASRESGMVIINSLALVETLMDSNRWADMFPCMIARTSTTEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDAIRSEASSPTFLNSRRLPSGCVVQDMPNGYSKVTWVEHAEYEESEVHELYRGLLSSGMGFGAQRWLATLQRQCECLAILMSSAPPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNNAANGVDEDIRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGVISRGPQNGPATINGTDNAVGPRGGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCEVSS* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0348 880 ProSitePatterns 'Homeobox' domain signature. 184 207 IPR017970 GO:0000981|GO:0006355
Aev02g0348 880 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 98 875 - -
Aev02g0348 880 CDD homeodomain 151 209 IPR001356 GO:0003677
Aev02g0348 880 ProSiteProfiles START domain profile. 373 610 IPR002913 GO:0008289
Aev02g0348 880 MobiDBLite consensus disorder prediction 116 132 - -
Aev02g0348 880 SMART START_1 382 607 IPR002913 GO:0008289
Aev02g0348 880 SUPERFAMILY Homeodomain-like 135 209 IPR009057 -
Aev02g0348 880 Gene3D - 138 225 - -
Aev02g0348 880 SUPERFAMILY Bet v1-like 635 871 - -
Aev02g0348 880 Pfam Homeodomain 152 207 IPR001356 GO:0003677
Aev02g0348 880 SUPERFAMILY Bet v1-like 376 607 - -
Aev02g0348 880 SMART HOX_1 150 213 IPR001356 GO:0003677
Aev02g0348 880 Coils Coil 203 235 - -
Aev02g0348 880 MobiDBLite consensus disorder prediction 103 159 - -
Aev02g0348 880 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 98 875 IPR042160 -
Aev02g0348 880 CDD START_ArGLABRA2_like 377 606 - -
Aev02g0348 880 Pfam START domain 382 607 IPR002913 GO:0008289
Aev02g0348 880 ProSiteProfiles 'Homeobox' domain profile. 149 209 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0348 Aev-Chr2 2520769 2528430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0348 12 877 Homeobox Transcription Factor Family AT3G61150 63.501 0.0 1027
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev02g0348 START 7.7e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0348 K09338 - gmx:100818372 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0348 02 2520769 2528430 Aev02g0348 02 2520769 2528430 ECH
Aev02g0348 02 2520769 2528430 Aev06g3190 06 33406100 33413354 ECH