Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0334 ATGGAAGCTGCAGCTGCCTCTTCACAGCATCGCCAGAGAAAGGCGAAGAGGAAGCGCGCCGCCGTGTCGGCGAGTGAACTCGAGCTCGAGCGACTCAACTCGCTGCCGTGGAACAGTTCTCTTGCTCAACGCGACAACGACAACGGCAACGGCAACGACGACGATGATGACTTCAACGATCCATTCGCTATGCTCGCAAACGGCTCCAGCGAGCTCGAAGGAGGATTCCTCTCGCTCGAGGAGATCGACGAAGCTGATTACGGTTTGGTTATTCCAGAACCTGAAAAACGTTTAGAGAGTAGGAAGAAGAAGAAGAAGAGTAAGCGCGACGAAAATGCGAAGGAAGAGAAGAAGGAGGAGGAGGAAGAAGTAGATGGAGGTGGTGATGGTGATGGTGGTGAGGTTGTTGAAGTGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGGAAACCGAAGTGGATACGGAAAACCAGAATGTTGAGAAACCAGATGCTGGTCTAGATACCGATGCGAAGGATGATGATGATGGTGTCGAGGAAGAAGATGTTGATGAAACTGAATTTTATGGGTGGAATGACTTGAGGCTTCATCCTATGATAATGAAGGCAATTTACAAGCTTGGCTTCAAGGAACCTACACCAATACAGAAAGCTTGTATTCCGGCTGCTGCTCATCAAGGAAAGGATGTTATTGGGGCTGCTGAGACAGGTTCCGGTAAAACACTTGCTTTTGGTTTACCCATTTTGCAACGTATTTTGGAGGAACGAGAGAAGGCTACAAAAATGGTTGAAGAAAGGAGCGAAGAGCCAGACAAGTATGCTCCTACAGGAATTCTGAGGGCTCTAATTATTGCCCCAACTAGAGAGCTTGCTCTTCAGGTCACTGATCATCTGAAAGCAGTAGCCAAGCATATTAATGTTAGGGTGACCCCTATTGTTGGTGGGATTTTAGCAGAAAAGCAAGAGAGACTTTTAAAAGCAAGGCCTGAGATTGTTGTTGGGACTCCAGGGAGGTTATGGGAACTTATGTCGGGTGGAGAAAAGCATCTAGTTGAGTTACATTCATTGTCTTTCTTTGTGCTTGATGAGGCTGATCGAATGGTACAAAATGGTCATTTCAAGGAATTGCAATCAATAATTGACATGCTTCCCATGTCCAATATCTCCACTGAAGATACCTCTCAACAAGCACAAAATTGTGTTACCGTTTCAAGCTACCAAAGAAAGAAAAGACAAACTCTTGTTTTTTCAGCAACTGTTGCACTTTCTGCTGATTTTCGCAAGAAGCTAAAGCGTGGTTTAATGAAACAAAAGCAATCATTGACCGATGGATTGAGTTCTATTGAAACTCTTTCTGAACGAGCTGGAATGAGATCCAATGCTGCAATTATTGATCTTACCAATCCATCAATATTAGCAGCAAAGCTTGAGGAATCATTTATTGAATGCAGGGAAGAAGACAAAGATGCCTATCTGTATTATATTTTGACTGTCCATGGACAAGGTCGCACAATAGTTTTCTGTACGTCAATTGCAGCTTTGCGCCATATTTCTTCCATTCTGCGGATTCTCGGTGTTAATGTTTGGACTCTTCATGCTCAAATGCAGCAGCGGGCACGTTTAAAGGCCATGGACCGTTTTCGTGAAAGTGAGAATGGTATACTTGTTGCTACAGATGTTGCTGCAAGGGGTCTTGATATCCCTGGTGTTAGAACTGTTGTCCACTATCAGCTTCCACATTCGGCAGAGGTTTATGTTCATAGAAGTGGAAGAACAGCTAGAGCTTCTGCTGAAGGTTGTAGTATTGCTTTAATCTCACCAAGAGATACAGCAAAGTTTGCTTCATTGTGCAAATCATTTTCTAAGGATATTTTTCAGCGGTTTCCTTTAGAAAACTCATACATGCCAGAGGTTCTAAGACGATTGTCTCTCGCACGTCAAATAGACAAGATAACACGGAAGGATTCACAGGAGAAAGCCGAGAAAAACTGGTTTGATCGGAATGCTAACTCGGTGGAATTAGTTACTGACAATTATGACAGTGAGGAGGAACAAGTGAACAAAATCAAGCAAATGAAAGTCGTCTCTAAACAGTTGAAGAAATTGCAGCAGGAGCTCAATTCGCTACTTTCGCGTCCTTTACAATCGAAATCGTTTTCACATCGATATTTAGCAGGGGCTGGTGTCACACCACTCTTGCAGGAACAGCTACAACAATTAGCCAAGCAAAAACTCAGTGATCACCAGGGCAAAAAGGGAAAATTGGTCGTGATTGGTCATGATTGTGTCGACGCGCTACAGGCACTGCGGAGTGCTGGCGAAGAGGTGCGCATGGATGTGAAGGATTTGGTTGGAAAACAGAGGAATATGGAAAATCTAAAAAGAAAAAGAAAAGAGGAAAAGAAACGTTTGCGTGATCAGCGAAGAAAGCAGAAGAGAAAGCTTAAACATGGAGAAGAATAG 2460 0.4366 MEAAAASSQHRQRKAKRKRAAVSASELELERLNSLPWNSSLAQRDNDNGNGNDDDDDFNDPFAMLANGSSELEGGFLSLEEIDEADYGLVIPEPEKRLESRKKKKKSKRDENAKEEKKEEEEEVDGGGDGDGGEVVEVKKKKKKKKKKETEVDTENQNVEKPDAGLDTDAKDDDDGVEEEDVDETEFYGWNDLRLHPMIMKAIYKLGFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRILEEREKATKMVEERSEEPDKYAPTGILRALIIAPTRELALQVTDHLKAVAKHINVRVTPIVGGILAEKQERLLKARPEIVVGTPGRLWELMSGGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNISTEDTSQQAQNCVTVSSYQRKKRQTLVFSATVALSADFRKKLKRGLMKQKQSLTDGLSSIETLSERAGMRSNAAIIDLTNPSILAAKLEESFIECREEDKDAYLYYILTVHGQGRTIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFRESENGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPRDTAKFASLCKSFSKDIFQRFPLENSYMPEVLRRLSLARQIDKITRKDSQEKAEKNWFDRNANSVELVTDNYDSEEEQVNKIKQMKVVSKQLKKLQQELNSLLSRPLQSKSFSHRYLAGAGVTPLLQEQLQQLAKQKLSDHQGKKGKLVVIGHDCVDALQALRSAGEEVRMDVKDLVGKQRNMENLKRKRKEEKKRLRDQRRKQKRKLKHGEE* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0334 819 MobiDBLite consensus disorder prediction 1 67 - -
Aev02g0334 819 CDD SF2_C_DEAD 475 604 - -
Aev02g0334 819 Coils Coil 138 158 - -
Aev02g0334 819 Pfam DEAD/DEAH box helicase 212 420 IPR011545 GO:0003676|GO:0005524
Aev02g0334 819 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 188 216 IPR014014 GO:0003724
Aev02g0334 819 MobiDBLite consensus disorder prediction 89 121 - -
Aev02g0334 819 Gene3D - 472 715 IPR027417 -
Aev02g0334 819 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 220 437 IPR014001 -
Aev02g0334 819 Coils Coil 671 711 - -
Aev02g0334 819 Coils Coil 782 819 - -
Aev02g0334 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 383 IPR027417 -
Aev02g0334 819 SMART ultradead3 207 450 IPR014001 -
Aev02g0334 819 MobiDBLite consensus disorder prediction 148 168 - -
Aev02g0334 819 PANTHER RNA HELICASE 99 744 - -
Aev02g0334 819 CDD DEADc_DDX24 199 464 - -
Aev02g0334 819 PANTHER ATP-DEPENDENT RNA HELICASE DDX24 99 744 - -
Aev02g0334 819 Pfam Helicase conserved C-terminal domain 486 594 IPR001650 -
Aev02g0334 819 MobiDBLite consensus disorder prediction 797 811 - -
Aev02g0334 819 Coils Coil 98 125 - -
Aev02g0334 819 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 359 367 IPR000629 -
Aev02g0334 819 MobiDBLite consensus disorder prediction 169 184 - -
Aev02g0334 819 Coils Coil 248 268 - -
Aev02g0334 819 MobiDBLite consensus disorder prediction 32 47 - -
Aev02g0334 819 MobiDBLite consensus disorder prediction 786 819 - -
Aev02g0334 819 MobiDBLite consensus disorder prediction 86 184 - -
Aev02g0334 819 Gene3D - 134 439 IPR027417 -
Aev02g0334 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 610 IPR027417 -
Aev02g0334 819 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 474 635 IPR001650 -
Aev02g0334 819 SMART helicmild6 514 595 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0334 Aev-Chr2 2442346 2448219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0334 189 635 Eukaryotic Initiation Factors Gene Family AT5G11200 28.390 2.31e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0334 K14805 - gmx:100806018 1149.81