Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0315 ATGGGAAGAGCACCATGTTGTGACAAGATGGGGTTGAAGAAAGGTCCTTGGACAGCTGAAGAAGATGAGATTCTTGTTGATTACATCAAGAAAAATGGTGGCCATGGAAGCTGGAGATCTCTCCCTAAGTTGGCAGGTCTTCTTAGATGTGGCAAGAGTTGCAGACTTAGGTGGACAAATTACCTTAGACCTGATATAAAACGTGGTCCCTTCACTCTTGAGGAAGAAAAACTTGTCATACAACTTCATGCCATCCTTGGAAATAGGTGGGCTGCTATTGCATCTCAGCTACCAGGAAGAACAGACAATGAGATAAAGAATCTATGGAACACACACTTGAAGAAGAGATTGATATGCATGGGGCTTGATCCACAAACACACATGCCAGTTACATCTTCATCATGTTACCCTTTTGACAAGTCATCAAAGGGTTGTTCTGTTTCCACAAGGCACATGGCTCAGTGGGAGAGTGCAAGGCTTGAAGCTGAAGCTAGGCTCTCAAGAGAATCATCTTTGTTCAATCATAATTATAATCATAATCATAATCATGATTCTGATTATTTCCTCAAGATTTGGAACTCTCAAGTTGGTGAATCTTTTAGGAGCATTAACAAATCAGAGGAAAAGACTAAGTGCATTAGTAGTACTAGTCCTGTTTCTGAAATGACAAGAAGAAATTCAAGCAACTTGAAGGAGGAATTATTGGATTGGAGCAATTCAAAGTCATCATCATTATTTGCTGCAGGTTTTATTCAAGGAGGGTCTGATTCATCAAGCTCTAATAACAATGACTTGGAAGACTCTTCTGATTCTGCATTGCAGCTATTGTTAGATTTCCCTATAAACAATGACATGAGCTTCTTAGAAGATAGCTCTTTTATTTGCCCCCTTTAG 894 0.3971 MGRAPCCDKMGLKKGPWTAEEDEILVDYIKKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTLEEEKLVIQLHAILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLICMGLDPQTHMPVTSSSCYPFDKSSKGCSVSTRHMAQWESARLEAEARLSRESSLFNHNYNHNHNHDSDYFLKIWNSQVGESFRSINKSEEKTKCISSTSPVSEMTRRNSSNLKEELLDWSNSKSSSLFAAGFIQGGSDSSSSNNNDLEDSSDSALQLLLDFPINNDMSFLEDSSFICPL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0315 297 PANTHER PROTEIN ODORANT1-LIKE 1 291 - -
Aev02g0315 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aev02g0315 297 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aev02g0315 297 CDD SANT 16 62 IPR001005 -
Aev02g0315 297 Gene3D - 70 117 - -
Aev02g0315 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aev02g0315 297 SMART sant 13 64 IPR001005 -
Aev02g0315 297 SMART sant 67 115 IPR001005 -
Aev02g0315 297 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Aev02g0315 297 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aev02g0315 297 Gene3D - 11 68 - -
Aev02g0315 297 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev02g0315 297 CDD SANT 70 113 IPR001005 -
Aev02g0315 297 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 291 - -
Aev02g0315 297 SUPERFAMILY Homeodomain-like 10 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0315 Aev-Chr2 2334733 2336965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0315 1 290 MYB Transcription Factor Family AT3G61250 65.068 4.16e-127 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev02g0315 Myb_DNA-binding 9.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0315 K09422 - gmx:100816569 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3226 06 33681222 33683990 Aev02g0315 02 2334733 2336965 PCT