Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0314 ATGAACAACAACAACAACAACAGAGCGAGGTACCCACCACCAGGGATCGGTGGTGGTGGTCTTGGGCGTGGAGGAGGAGGAGGAGGAAGTGTTGGAGGTGGTTACAATCAAAACGCGCCGTTTCAGCCTAGACCCAATTACCAGCAGCATCAGCAACAACAACAACAACAACTGCGCCAGCAATACGCGCAGAGGCAAATGGTGCAGCAGCAACAACAACAGCACCAACAGCAACAGCAACAGCAACTGCAGCAACAACAGTGGCTGAGAAGGGCGCAATTTGGTGGTTCTGATTCGAACGTCGTCGTAGATGAGGTCGAGAAGACTGTCCAGTCTGAAGCCATTGACTCGAGTTCACAAGATTGGAAGGCAAGACTGAAAGCTCCACCACCTGACACACGCTATAAGACAGAGGATGTGACAGCAACAAAAGGAAATGAATTTGAGGATTACTTTTTGAAGCGAGAGCTGCTTATGGGAATTTATGAGAAGGGTTTTGAAAGGCCTTCTCCTATTCAAGAAGAGAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGCAAGGGCTAAAAACGGAACAGGAAAAACAGCTGCATTTTGCATTCCTGCATTGGAAAAAATTGATCAGGATAACAATGTTATTCAAGTTGTTATACTGGTCCCAACACGAGAGTTGGCTTTGCAAACATCTCAAGTTTGTAAAGAGCTTGGAAAGCATTTGAAAATCCAAGTTATGGTTACAACAGGCGGTACCAGCCTGAAAGATGATATTATGCGTTTATATCAACCAGTTCATTTACTAGTTGGAACCCCTGGAAGAATATTAGATCTTGCTAAGAAGGGGGTTTGTGTTCTGAAAGATTGCTCAATGCTTGTTATGGACGAGGCTGATAAGCTTCTCTCTCCAGAGTTTCAACCTTCTATACAGCAGCTCATTCAATTTCTTCCTGCAAATCGTCAAATTCTGATGTTTTCTGCAACATTTCCTGTTACTGTAAAAGACTTCAAAGATAGATTTCTTCATAAGCCATATGTCATTAACCTTATGGATGAGCTAACACTGAAGGGTATCACACAATATTATGCATTTGTCGAAGAGAGACAGAAAGTCCACTGCCTGAATACCCTATTTTCTAAGTTGCAAATAAACCAGTCGATCATCTTTTGCAATTCGGTGAATCGAGTTGAGCTCCTTGCCAAGAAAATCACTGAACTTGGATATTCGTGTTTCTACATTCATGCAAAGATGTTGCAAGACCATCGTAATAGAGTATTTCATGACTTCCGCAATGGTGCATGCCGAAATCTTGTTTGTACTGATCTTTTTACTAGGGGAATAGACATACAAGCTGTCAATGTTGTTATTAACTTTGACTTTCCTAAGAATTCAGAAACTTATCTGCACAGGGTTGGTCGTTCTGGGAGGTTTGGGCACCTTGGTTTAGCAGTGAACTTGATCACTTATGAGGATCGCTTTAATTTATATAGGATTGAACAAGAACTCGGAACTGAAATCAAGCAAATTCCACCACACATTGATCAGGCAATTTATTGCCGAGACAAAGTCATAAAAGTGGATACACTGCCAAAATTACCTAAAACTACCCCTCAAATCTTAACCCTACCATCTCACCACCATCTTCATCCTCCGTCCCCCACCATCTTCATCCTTGGTCTCTCATCTCTCTCTTTCTATTCCCGTCCGCGCCGTCGCCCTCAGATCTGTGAGGAACAAGGTGGCGCTGCCTTCAAAGTCTCGACGGTGGCCTCGGATTCAGCGAGACAGCAGCAACGACGGCGCCTCGCAGCCCCTCGGTCACCTCCCTCTACGGTGCCTTTCTTCTCCTCCCTTCTCTTCCTCTCTCTCCCTCGGGCGCCCTCCGTTGTAGCCGCGACGTCACCTCGTCATCGTCCAGCTGCCTCCGCGAACCACCACAGCCAAAGCTTCTCCATGGCGCCACGCCGCCGCTCCCTAGCATTGCTTCTTCTCCTCGGTTCCGATCTCGCTCCCCCTCTCTCTCTCTGCTATCTCTCTGTGTCTGCTCTCCCTCTCTTCCAGTCCGCCATGGGAGGGAGCTCCGAGCTCTCTCTCACCACCGCGGGTTTCTCATCACATATCTCTTTCTCTTTGTCTCTCCTCTTTCATCGCAGCAGCCGCGGGTAA 2166 0.4645 MNNNNNNRARYPPPGIGGGGLGRGGGGGGSVGGGYNQNAPFQPRPNYQQHQQQQQQQLRQQYAQRQMVQQQQQQHQQQQQQQLQQQQWLRRAQFGGSDSNVVVDEVEKTVQSEAIDSSSQDWKARLKAPPPDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIQQLIQFLPANRQILMFSATFPVTVKDFKDRFLHKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCRDKVIKVDTLPKLPKTTPQILTLPSHHHLHPPSPTIFILGLSSLSFYSRPRRRPQICEEQGGAAFKVSTVASDSARQQQRRRLAAPRSPPSTVPFFSSLLFLSLPRAPSVVAATSPRHRPAASANHHSQSFSMAPRRRSLALLLLLGSDLAPPLSLCYLSVSALPLFQSAMGGSSELSLTTAGFSSHISFSLSLLFHRSSRG* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0314 721 CDD SF2_C_DEAD 358 487 - -
Aev02g0314 721 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 293 301 IPR000629 -
Aev02g0314 721 SMART ultradead3 165 361 IPR014001 -
Aev02g0314 721 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 7 520 - -
Aev02g0314 721 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 146 174 IPR014014 GO:0003724
Aev02g0314 721 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 12 7 520 - -
Aev02g0314 721 MobiDBLite consensus disorder prediction 589 608 - -
Aev02g0314 721 MobiDBLite consensus disorder prediction 35 63 - -
Aev02g0314 721 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 357 517 IPR001650 -
Aev02g0314 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 500 IPR027417 -
Aev02g0314 721 CDD DEADc_DDX6 148 348 - -
Aev02g0314 721 MobiDBLite consensus disorder prediction 1 63 - -
Aev02g0314 721 SMART helicmild6 397 478 IPR001650 -
Aev02g0314 721 Gene3D - 101 350 IPR027417 -
Aev02g0314 721 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 177 347 IPR014001 -
Aev02g0314 721 MobiDBLite consensus disorder prediction 112 137 - -
Aev02g0314 721 Gene3D - 351 525 IPR027417 -
Aev02g0314 721 Pfam DEAD/DEAH box helicase 171 335 IPR011545 GO:0003676|GO:0005524
Aev02g0314 721 Pfam Helicase conserved C-terminal domain 372 478 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0314 Aev-Chr2 2319429 2324562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0314 148 517 Eukaryotic Initiation Factors Gene Family AT3G19760 38.441 3.52e-92 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0314 K12614 - tcc:18614173 851.662