Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0308 ATGGATCGCGGGGATCAAATGGCGTTATCCGGTTCTGCATCTTACTATATGCAGAGAGGGATTCCTGGTTCTGGGGCACCACAACCGGAGTTGCACAATTCGCCTAGTATGCGTCAGCTGTCGAATCCCAATCTGCCTTTCCAATCAAGCATTGGGGGTGGTAACATTGGATCCACATTGCCATTGGAATCATCGGGAATTTCGTCTCAGTGTGTCAATGTTGGTGCTCCTTCCGGGGCTCTGCCTGGGGAGCAAGTGAAAAGGAAGAGAGGTAGGCCTAGGAAGTATGGGCCCGATGGAACCGTTTCACTAGCATTGACTCCAACAACGCCAGCTAGTCATCCTGGAGCCATGCCACAAGGCCAGAAACGGGGTAGAGGGCGCCCGCCGGGATCTGGGAAGAAGCAGCAGCTGGCTTCTCTTGGTGAACTGATGTCTGGATCGGCTGGGATGGGTTTCACGCCTCATATCATCACTGTCGCTATTGGAGAGGACATTGCAACGAAAATCATGGCATTTTCTCAGCAGGGGCCTCGAGCTATATGCATTTTGTCAGCCACTGGTGCTGTCTCGACGGTGACACTTCGCCAACCTTCAACTTCAGGTGGCACTGTCACATATGAGGGGCGTTTTGAGATATTGTGCCTGGCAGGCTCTTACTTGCCTACTGATAATAGTGGCTCGCGCAGCCGAACTGGTGGACTAAGCATTTCCCTTGCTAGTCCTGATGGTCGTGTCATTGGTGGAGGAGTTGGTGGAGTGCTTATTGCAGCAAGTCCGGCTCAGGTGATAGTTGGGAGCTTCGTATGGGGTGGACCGAAGGGGAAGAACAAGAGGAAGGAAAGGTCTGAAAGCGCAGACGCTGCTATGGAGCCGGATCATCAGACAGTTCATAATCCAGTCCCGGTGAATAACATTTCCCCGAACCAAAATCTTACTCCAACCTCATCTCTTAGTCCGTGGCCTGCTTCGCGACCATTGGATATGCGCAATTCCCATATTGACATCGATTTAATGCGCGGGTGA 1026 0.5224 MDRGDQMALSGSASYYMQRGIPGSGAPQPELHNSPSMRQLSNPNLPFQSSIGGGNIGSTLPLESSGISSQCVNVGAPSGALPGEQVKRKRGRPRKYGPDGTVSLALTPTTPASHPGAMPQGQKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITVAIGEDIATKIMAFSQQGPRAICILSATGAVSTVTLRQPSTSGGTVTYEGRFEILCLAGSYLPTDNSGSRSRTGGLSISLASPDGRVIGGGVGGVLIAASPAQVIVGSFVWGGPKGKNKRKERSESADAAMEPDHQTVHNPVPVNNISPNQNLTPTSSLSPWPASRPLDMRNSHIDIDLMRG* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0308 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 269 IPR005175 -
Aev02g0308 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 317 IPR039605 GO:0003680
Aev02g0308 341 MobiDBLite consensus disorder prediction 29 75 - -
Aev02g0308 341 MobiDBLite consensus disorder prediction 298 322 - -
Aev02g0308 341 MobiDBLite consensus disorder prediction 1 138 - -
Aev02g0308 341 CDD DUF296 154 268 IPR005175 -
Aev02g0308 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 317 - -
Aev02g0308 341 ProSiteProfiles PPC domain profile profile. 149 293 IPR005175 -
Aev02g0308 341 MobiDBLite consensus disorder prediction 273 327 - -
Aev02g0308 341 SMART AT_hook_2 123 135 IPR017956 GO:0003677
Aev02g0308 341 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Aev02g0308 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 270 - -
Aev02g0308 341 Gene3D - 155 286 - -
Aev02g0308 341 MobiDBLite consensus disorder prediction 274 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0308 Aev-Chr2 2288337 2291985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0308 1 341 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 52.222 1.14e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0308 - - gmx:100799791 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0308 02 2288337 2291985 Aev02g0308 02 2288337 2291985 ECH
Aev06g3233 06 33725664 33728572 Aev02g0308 02 2288337 2291985 PCT