Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0278 ATGGGAGGTTGCTGTTGTTCTGCCAGAAAATCTCATCTTCATGGAGCACCAGTGTATTATTATTGCCCTGCAACTTTGGAAGAGCGTGAGTCGTTAACCTCCAATGATGCTACGGCCGCTTCGCTCACCGCAGGATTGCTTGTCAGTTTGAACCTGGAAGCATCCACACCTGATGCTTATCGGCCCCCTCCGGCACCTCTACCGTATGATATGGTCTTAGGAGGGACTGCATCAACAGATTCTGAGTCAGGCAGAGAAATAGTTAGTGGTAGTAGTTTTGAAACTTTAATTACATGTGAAGATCTTGAAGAACTAGACGGTAAAGCTCGAGCTAATTCGGAACCTATATCTCCATGGAAGCCAGAACTTATAAAATCAAATGAATCTTATGCAGTAGTGACAGAAGAAGAGGATGTCTGTCCAATTTGTCTTGAAGAATATGATGTTGAGAATCCTAAAACTCTGACGAAATGCGATCACCACTTTCACCTTTCTTGCATTCTTGAGTGGATGGAAAGAAGTGATTCATGTCCTATATGTGATCAGGAGATGATATTTGACCAAACACTGAATTAG 576 0.4271 MGGCCCSARKSHLHGAPVYYYCPATLEERESLTSNDATAASLTAGLLVSLNLEASTPDAYRPPPAPLPYDMVLGGTASTDSESGREIVSGSSFETLITCEDLEELDGKARANSEPISPWKPELIKSNESYAVVTEEEDVCPICLEEYDVENPKTLTKCDHHFHLSCILEWMERSDSCPICDQEMIFDQTLN* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0278 191 Pfam Ring finger domain 139 180 IPR001841 -
Aev02g0278 191 SUPERFAMILY RING/U-box 132 187 - -
Aev02g0278 191 SMART ring_2 140 180 IPR001841 -
Aev02g0278 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Aev02g0278 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 187 IPR013083 -
Aev02g0278 191 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED 1 191 - -
Aev02g0278 191 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0278 Aev-Chr2 2014212 2015349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0278 1 191 C3H Transcription Factor Family AT4G00335 57.068 1.18e-73 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0278 - - gmx:100792561 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3269 06 34034190 34035697 Aev02g0278 02 2014212 2015349 PCT