Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0253 ATGGTGTCGGTGAATCCGAATCCAGCTCAAGGCTTCTACTTCTTCGATCCTTCCAATATGGGACTTCCCGGCAACAATCCACTCCCTCCGCCGCCTGCTCCTCCTGCTCCGGCTGCCGCTTCCTCCGCCGTTAACCCGGTGGAGGATCCGAATAAGAAGATCCGGAAACCCTACACGATTACCAAGTCTAGAGAGAGCTGGACTGAGCAGGAGCACGATAAGTTTCTAGAAGCTCTTCAATTATTCGATCGTGACTGGAAGAAGATTGAGGCATTTGTTGGTTCGAAAACCGTAATCCAGATACGAAGTCATGCACAAAAGTATTTTCTTAAAGTCCAGAAGAATGGAACAAGTGAACATGTACCTCCCCCTCGGCCGAAGAGAAAAGCTGCCCACCCATACCCTCAAAAAGCTCCTAAAAGCGCGCCTACTGCATCCCAGGTCACTGGGCCGATGCAATCTTCATCTGCTTTCATAGAACCTGCATACATTTATGCCCCAGAGTCATCATCTGTGCTCGGAACTCCAGTTACCAGTGTGCCTTTAACTTCTTGGAATTATAATACTGTGCCGCCAGGCAACGTGCTACAAGTGACTAAAGATGATATGGGATTGGCTGGAGCTGGACAAGCTGTTCCTCTTGGTTGTTGCTATAGCAGTAGTACCGAGAGCACCCCTCCAACTTGGCCAAGTAACAGTGGGATTGATCAAAGAAACCAGGGCAAGCCAACTAAAGTCATGCCTGATTTTGCTCAAGTCTACAGCTTCATTGGCAGTGTATTTGATCCAAGTTCAACTAATCACCTACAGAGGCTGAAACAGATGGACCCAATCAATGTGGAAACGGTATTGCTGTTGATGAGAAACCTCTCTATGAATTTAATGAGTCCTGAATTTGAGGATCATAGGAGGCTGCTTTCATCATACGATGCAAACTCTGGGGAGTCGAAATTTGTCAATCCATACAACAAATCCTTCACTGAAAAATCTGAAAGTGCTGTTCTATCTGCTTAG 1014 0.4675 MVSVNPNPAQGFYFFDPSNMGLPGNNPLPPPPAPPAPAAASSAVNPVEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKSAPTASQVTGPMQSSSAFIEPAYIYAPESSSVLGTPVTSVPLTSWNYNTVPPGNVLQVTKDDMGLAGAGQAVPLGCCYSSSTESTPPTWPSNSGIDQRNQGKPTKVMPDFAQVYSFIGSVFDPSSTNHLQRLKQMDPINVETVLLLMRNLSMNLMSPEFEDHRRLLSSYDANSGESKFVNPYNKSFTEKSESAVLSA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0253 337 MobiDBLite consensus disorder prediction 15 65 - -
Aev02g0253 337 Gene3D - 67 114 - -
Aev02g0253 337 MobiDBLite consensus disorder prediction 114 151 - -
Aev02g0253 337 MobiDBLite consensus disorder prediction 23 39 - -
Aev02g0253 337 PANTHER MYB TRANSCRIPTION FACTOR 2 332 - -
Aev02g0253 337 PANTHER SWI/SNF COMPLEX-RELATED 2 332 - -
Aev02g0253 337 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 62 111 IPR006447 GO:0003677
Aev02g0253 337 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Aev02g0253 337 ProSiteProfiles SANT domain profile. 62 115 IPR017884 -
Aev02g0253 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Aev02g0253 337 Pfam Myb-like DNA-binding domain 64 109 IPR001005 -
Aev02g0253 337 MobiDBLite consensus disorder prediction 49 65 - -
Aev02g0253 337 CDD SANT 66 109 IPR001005 -
Aev02g0253 337 SMART sant 63 111 IPR001005 -
Aev02g0253 337 SUPERFAMILY Homeodomain-like 58 114 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0253 Aev-Chr2 1833081 1837334 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev02g0253 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0253 - - adu:107472769 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2873 05 29617055 29620815 Aev02g0253 02 1833081 1837334 PCT