Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0248 ATGGTCGACGAAGGTGGCGGCGACTTCTCCGGCACAATTTGCTCCATCTGCTACGAAGATCTCAAGCCTAATATTGAAGAACTTCAATCAATCTCCATCTGCGGCCATGTTTTCCATGGGCTTTGTTTGCAGCAATGGTTTGAGTATTGTCACAAAGCAAAGAAGCACACTTGCCCTGTTTGCAAGCAGAGTTGCAAGGCTAGTGATGCTTGCAAGCTTTACTTCCAATCTGTGGGAGAGGTAGATGAAGCTGTTATCCCTCGGAAGCCATTTGATTCTGAGGAAGATGCAGGGATTCTGCGAAAGGAAGTGAAGAGGTTGGAGGTCAAGGTTTCGGGGCTTGGTTCCGAATTGGACCTAAAGGGGAAGGAATTAGAGGAACTCACCAAAGAGCTTGGTGCTTGCAAGGAGCAGGCAAAGGTAGAGGTAGTGTTAAGAAATGAGGCTTTGAAACAAAAAGCATCGATGCAATCCCAGCTTCGTGTGAAGTCAGAGGAACTTGAGAAGACAACTTTTGAGTGTTTTAGATTACAAGAAAGAAATATGGCTTTGGCTAAGGAAATTGCCACATTAAAATTAGTCTCTGATCTTGATCTTAATGAAGAGGATGCTTTGAAGCTTGCAACTTTGGGAAATGGGTCTAACCATAAAGACACATTAGCAAGATCTCTGGTCGTGCGAAACAGGGAATATAGAGAATTAATTTCCAAGTGCAATCTCTTGGGAAGAGTTGAAGATCGTTACAGTAAAAAGCTTGAGAAGGCCAAGGAGAAGATTGTTAAATTGAAGGCAAGAGTACAAGAACTGGAAACAGCTGCTCAAGTAAGAGAGAACCAATATCTGATGTCTTTGAAAGGTTTAAAGAGAAAGAGGTGTTCAAACAATCTTGACAATAGCACCAATTCTGATGCTGATGTATTGAAAGCCTGCAAGATTTCATTAAGTGAGCAAAAGAAACAGAATTCAACACTCAATTCTGAAACAGATCCGAGTGTGAGCAACAATGAACCTCTACAGTTTTTGAGGACAGAGAATTGCATTGCTGCTGAAAATAAAACTGTAAATTTGAGTAATGGAAGTAAGTCTACACAGTCTCTTGATAAGGAGAGAAATTTCATTTCAATTGATGATGACACTTCAGAAATCGCCAAAACTTTGCTGGGACGTTCAAGAAATGACCGTAAAGATGAAACCACGGACGATGCTGCTCCTAGTAAGCCTACTATTGTGGAGTCAGATTATGCAGCAATGCAAGAGAAAAATAATTTGGCAGAGTCTTCAAGAATTGATGTTGACATTGAAATGGCTAACACTTCTGTTAATGCTATGGATGAAGATGTAATAATACTTACTAATACTAAACAAGTTCAACCCATTGTTAACATCAGAAAGGAGTCCCCATTAACCATTGCAAATCCTGGGGAGATTTGTTTTTCGGGTGGATTGCTTGGTCCTGATGGATCGCATCGATACTTGGGTAAATGGTGCAAGCGTGGACTAAACAGTGAATCAACATCTGCAAAAGGTTCAGGTAATGGAGACTTGATAGCTGTTGGAGCTGATGGTAGAGGTGGCAGAATCAAAGTTCTAAGAACTCCAAACCAAATCTTCTCGAATGGTAAGGAAAATTCACTAAGTTCTAAAAGGTTAAAGACAGCACCTAAAACAAGTAGCTTAAGACCCCAGGGATGCTTGCAGATAGAACACTTCTTTGGGAGGGTCACTCAATAA 1731 0.4096 MVDEGGGDFSGTICSICYEDLKPNIEELQSISICGHVFHGLCLQQWFEYCHKAKKHTCPVCKQSCKASDACKLYFQSVGEVDEAVIPRKPFDSEEDAGILRKEVKRLEVKVSGLGSELDLKGKELEELTKELGACKEQAKVEVVLRNEALKQKASMQSQLRVKSEELEKTTFECFRLQERNMALAKEIATLKLVSDLDLNEEDALKLATLGNGSNHKDTLARSLVVRNREYRELISKCNLLGRVEDRYSKKLEKAKEKIVKLKARVQELETAAQVRENQYLMSLKGLKRKRCSNNLDNSTNSDADVLKACKISLSEQKKQNSTLNSETDPSVSNNEPLQFLRTENCIAAENKTVNLSNGSKSTQSLDKERNFISIDDDTSEIAKTLLGRSRNDRKDETTDDAAPSKPTIVESDYAAMQEKNNLAESSRIDVDIEMANTSVNAMDEDVIILTNTKQVQPIVNIRKESPLTIANPGEICFSGGLLGPDGSHRYLGKWCKRGLNSESTSAKGSGNGDLIAVGADGRGGRIKVLRTPNQIFSNGKENSLSSKRLKTAPKTSSLRPQGCLQIEHFFGRVTQ* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0248 576 CDD RING-H2 14 62 - -
Aev02g0248 576 PANTHER RING ZINC FINGER PROTEIN-RELATED 3 575 - -
Aev02g0248 576 MobiDBLite consensus disorder prediction 386 402 - -
Aev02g0248 576 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 69 IPR013083 -
Aev02g0248 576 SUPERFAMILY RING/U-box 11 67 - -
Aev02g0248 576 Coils Coil 118 138 - -
Aev02g0248 576 SMART ring_2 14 61 IPR001841 -
Aev02g0248 576 Pfam Ring finger domain 13 62 IPR001841 -
Aev02g0248 576 Coils Coil 245 279 - -
Aev02g0248 576 MobiDBLite consensus disorder prediction 386 406 - -
Aev02g0248 576 ProSiteProfiles Zinc finger RING-type profile. 14 62 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0248 13 576 C3H Transcription Factor Family AT4G01270 40.625 8.90e-116 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0248 K11985 - gmx:100812811 699.893