Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0238 ATGTCTTTCTTCTCTACCTCTCCACCACCACCACTACCACCACAAACCACCGCCACCGCCGCCACATACATCACAAACCTCGGCTTCGGTTACTCCATAGCCATAGCACTCGGCTTCCTCTTCCTCCTCTCCACAATCATCCTCTCTTCCTACCTCTGTTGCCGCACCCTCCGCAACAACAACAACCACGACCACGACCACAACAACGGAGGTGTCGTTCTGCCCCGCGTGATTTTCGTCGCAGAAGACGACCATGACGCGGGGCAGAACGACACCAACATCGTACTCGGCCTAGACCAGAGCGTCATAAACTCGTACCCGAAATTTCAACACAACAACAAGGATGGAAACAAGAACGTTTTCGGTGGAAATTACGACGGCGTGTGTTCGATCTGTTTGTGTGAGTACAAGGATTCGGAGATTTTAAGGATGATGCCGGAGTGTAGGCACTGCTTCCACGCGAGCTGTCTCGACGCGTGGCTGAAGCTCAATGGTTCGTGTCCGGTTTGTAGGAACTCGCCAATGCCAACGCCATTGTCAACACCATTGCAAGAAGTGGTGCCTCTTGCTCACTATGCCGCAGATCATAGAAGGCCAAGGAATTGA 606 0.5264 MSFFSTSPPPPLPPQTTATAATYITNLGFGYSIAIALGFLFLLSTIILSSYLCCRTLRNNNNHDHDHNNGGVVLPRVIFVAEDDHDAGQNDTNIVLGLDQSVINSYPKFQHNNKDGNKNVFGGNYDGVCSICLCEYKDSEILRMMPECRHCFHASCLDAWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLAHYAADHRRPRN* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0238 201 SUPERFAMILY RING/U-box 104 176 - -
Aev02g0238 201 SMART ring_2 129 170 IPR001841 -
Aev02g0238 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 176 IPR013083 -
Aev02g0238 201 PANTHER RING-H2 FINGER PROTEIN ATL67 17 198 IPR044289 GO:0016567|GO:0016740
Aev02g0238 201 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Aev02g0238 201 Pfam Ring finger domain 129 171 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0238 Aev-Chr2 1743946 1744551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0238 25 190 C3H Transcription Factor Family AT5G07040 40.964 2.56e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0238 - - qsu:112012943 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3301 06 34365172 34365768 Aev02g0238 02 1743946 1744551 PCT