Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0188 ATGCCCACAACAACGAAACTCTTATTCTCCCAAATTCGCCTCTTCAATCCTCTTTCTTCTTCTTCCTTCGTAATTATGAATAGCCCTTCTTTACGTTCTTCTAGAACCTTCTTTTCGTCTTCTTCTTCTTGTTCTAATTCTTTCCCTTTCCCCTTCAAGTTCAAGTACCTTGCTCTCCGAAACGCACCGTTTCGAATCCGCGCTTTATCCTCCTCAACTCGCTCCGAGTTCACTCGCTCCCAAACTCGCCGCCGTGAAAACACTAACAGCAACGGTAATGACAACCGTCGCGGTTCTTCTTCTTCTTCTTCTTCCTTTTCGAAGAGCCTTGTTGATGATGAGGCTGAGCTCAGCGACTGGGTCGACGGGTTGAGGAAGGTACGACTCGACGATGACGACTCGTTCGGCGAGTCAACTCGGAACCGGAGCAGCAGGGTTCAGCCGGGTCGTCGTGACCGGGTCGACTCGTCGTTCTCGAGGAACCCTAGGTTTTCGAGGAGATTCAATCGCGAAATTGAGGATAATGATGAAGATGGAGGAGAAAAAGAAGATGAATTTAGGTTGAGGAAGAAGAGAAGGGGTGGTGAATTGAGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAACAGGGAAGGTTGCTAGGAGAAGGTTTCAATCGAGTGATGATGAAGAAGTTGTGGTGCGAGGAAAGGGATTGAAGGGTTTTGTTGTGAGTGAAGAAGAAGAAGAAGAAGAGAGTGACGATGATGGTGATGAGATTATGAACAAGAGTAGAAGTGCTCTGTTTGGTGGTGGAAGTGCAACTCCAAAACAAAAAGCTTCTTCTCCTTCAACTGGGGGATCTGATTCATATTTGAGTGAAACTAGATTCGATCAGTGCTCTGTCTCCCCATTATCATTAAAAGCAGTCAAGGCGGCTGGATATGAGAAAATGACTGTTGTGCAGGAGGCAACTCTTCCAGTTATACTGAAAGGTAAGGATGTTCTCGCCAAGGCTAAAACAGGCACTGGAAAAACAGTGGCCTTTTTGCTTCCATCAATTGAAGTTGTTGCAAATTCACCTCCAACGGATCGTGATCATAGGCGGCCACCAATTCTTGTGCTTGTCATATGCCCTACTCGAGAGCTTGCAAGTCAAGCTTCTGCAGAAGCCACTAAACTGCTGAAATATCATCCTACCATCGGTGTTCAGGTTGTGATTGGAGGCACAAGACTTGCTTTAGAACAAAAACGTATGCAAGCAAACCCTTGCCAGATCCTTGTCGCTACACCTGGAAGGCTTAGAGATCATATTGAGAATACTGCGGGTTTCGCAACTCGGTTGATGGGTGTGAAAGTCTTGGTGCTTGATGAAGCTGATCATTTACTAGATATGGGATTTCGGAAAGACATTGAGAAGATAGTTGCTGCAGTCCCTAAACAACGACAAACTCTTCTTTTCTCTGCCACCGTTCCAGAAGAGGTGCGTCAAATCTGTCATATTGCTCTGAGAAGGGATCATGAATTTATCAATACAGTTGAAGAGGGTTCTGAGGAGACACATGCACAGGTTCGCCAAATGCATTTAGTTGCCCCATTAAACAAGCATTTCCCTTTACTCTATGCTCTTCTGAAGGAGCACATTGCAGATGATGTTGATTACAAGGTTCTTGTTTTCTGCACAACTGCTATGGTCACAAGATTAGTTGCTGAACTTCTTGGTGAGTTGAACTTGAATGTCAGAGAAATCCATTCAAGAAAGCCACAGAGTTACAGAACCAGAGTCTCCGAAGAGTTTCGGAAGTCAAAGGGACTCATCTTGGTTACATCGGACGTTTCTGCTCGCGGAGTTGATTATCCAGATGTGACTCTTGTCGTTCAGGTTGGTTTACCGGCTGATAGAGAACAGTATATACATAGACTCGGCAGAACAGGGCGAAGGGGGAAAGAAGGCCAAGGTATATTGCTTCTGGCTCCTTGGGAAGAGTTCTTTTTATCTACTGTGAAAGATTTGCCTATAGAGAAAGCTCCAGTGCCTTCTGTTGATCCTGACACCACCAAAAAGGTGGAGAAGGGTCTATGCCATGTGGAGATGAAGAGCAAAGAAGCAGCATATCAGGCATGGCTTGGATACTACAACTCAAACAAGAAAGTGGGGCGCGACAAGCATGCCCTTGTGGAGCTTGCTAATGAGTTCAGCAGATGCATGGGTCTTGATCACCCTCCTGCTATTCCTAAGCTTGTTCTTGGCAAGATGGGACTCAAGAACATCCCTGGCTTGCGTTCCAAATAG 2274 0.4609 MPTTTKLLFSQIRLFNPLSSSSFVIMNSPSLRSSRTFFSSSSSCSNSFPFPFKFKYLALRNAPFRIRALSSSTRSEFTRSQTRRRENTNSNGNDNRRGSSSSSSSFSKSLVDDEAELSDWVDGLRKVRLDDDDSFGESTRNRSSRVQPGRRDRVDSSFSRNPRFSRRFNREIEDNDEDGGEKEDEFRLRKKRRGGELRRGGGGGGGGGGTGKVARRRFQSSDDEEVVVRGKGLKGFVVSEEEEEEESDDDGDEIMNKSRSALFGGGSATPKQKASSPSTGGSDSYLSETRFDQCSVSPLSLKAVKAAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVANSPPTDRDHRRPPILVLVICPTRELASQASAEATKLLKYHPTIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLRDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIVAAVPKQRQTLLFSATVPEEVRQICHIALRRDHEFINTVEEGSEETHAQVRQMHLVAPLNKHFPLLYALLKEHIADDVDYKVLVFCTTAMVTRLVAELLGELNLNVREIHSRKPQSYRTRVSEEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADREQYIHRLGRTGRRGKEGQGILLLAPWEEFFLSTVKDLPIEKAPVPSVDPDTTKKVEKGLCHVEMKSKEAAYQAWLGYYNSNKKVGRDKHALVELANEFSRCMGLDHPPAIPKLVLGKMGLKNIPGLRSK* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0188 757 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 289 317 IPR014014 GO:0003724
Aev02g0188 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 658 IPR027417 -
Aev02g0188 757 MobiDBLite consensus disorder prediction 84 110 - -
Aev02g0188 757 MobiDBLite consensus disorder prediction 75 110 - -
Aev02g0188 757 CDD DEADc_MSS116 296 505 - -
Aev02g0188 757 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 320 503 IPR014001 -
Aev02g0188 757 MobiDBLite consensus disorder prediction 131 285 - -
Aev02g0188 757 MobiDBLite consensus disorder prediction 216 238 - -
Aev02g0188 757 CDD SF2_C_DEAD 518 651 - -
Aev02g0188 757 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 25 253 755 - -
Aev02g0188 757 Pfam DEAD/DEAH box helicase 314 491 IPR011545 GO:0003676|GO:0005524
Aev02g0188 757 MobiDBLite consensus disorder prediction 262 285 - -
Aev02g0188 757 Pfam Helicase conserved C-terminal domain 535 642 IPR001650 -
Aev02g0188 757 PANTHER RNA HELICASE 253 755 - -
Aev02g0188 757 Gene3D - 512 734 IPR027417 -
Aev02g0188 757 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 537 684 IPR001650 -
Aev02g0188 757 MobiDBLite consensus disorder prediction 131 175 - -
Aev02g0188 757 Gene3D - 240 504 IPR027417 -
Aev02g0188 757 SMART helicmild6 561 642 IPR001650 -
Aev02g0188 757 SMART ultradead3 308 521 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0188 Aev-Chr2 1389012 1394123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0188 289 670 Eukaryotic Initiation Factors Gene Family AT3G19760 27.638 6.60e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0188 - - adu:107463398 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0188 02 1389012 1394123 Aev02g0188 02 1389012 1394123 ECH