Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0184 ATGCAGACATTAGATGCTAGGCATATAGAGCTATTCCTCTCTGAAGGATACCAAAATGGGAACTGGGAGTACCAGCTTGTAGGATCTCATGATATCAAAAAACGAGCAGATGGGGCTGCTGGTGCCATTTTTGATGTCAAGCACCTAGAGGACTCATCCACTTCTGCGATATTCGACTACAAGTCATGGATTGGGAGGCCGAACGATTGGCAACCCAAAGCCATGATTGCTTTCCATGCTGTTGCTGTGAACACTAATTTACAAGAAAATGAAGGTATTAATGTGAAATACCAAGCTATGAGGGCAGGAACTGATGGAGAAGTTGTTTCCATTAGAATCTCTCAGCAGCTTCTTGATATCCTTATTCGTTTCCCTTTTCAACTAGAATCTGACCAAAATCCATATTGTGGCTACCCTGGTTTCAAATTATCATGTACTAATGATAGCAAAACAGTTCTAAACCTTCCTTTCTCTGGACAATTCTACGTTCGCAAAATTGACTATCTCACACAGCAGATTCAACTCTACGACCCTGATCATTGCCTCCCCAATCGTCGTCTTCGCCTCAATCTTTCTGGTTCTCCCTTCACTCCTACTTTGAGCCGTGACTACACTTTCTTCAGCTGTTCAACCAGGAACGCGACGACGAAGCAGTTCGTTCCCATCGATTGTCTCAGCAATTCCACAAGCTTTGTATCAGCTTTCCCTTCAGTGAACTTGGCGGCCAATGATCCTTTGCCTCAGTCTTGCAGTGTTATTGGAAACGTTTCAGTTCCAGTTTCAACTTCTTCATATGTTGGGAATATCAGCGATGAACTTAGCCAAGATCTTAGATTAACATGGAACAAGCCTAACTGCAGAATTTGTGAATCACAAGGGCTAATGTGTGGATTTGAAAGCACAACCAGTGATCAAGTTAAATGTGCCTCTGATTTTCAAACAGGTACTTCAAGAGGACTCATAATATTCAGAATCATCACACTATGCATTGTTGGGCCAGCTTCAACATTTGCTATAGTGATGGCAATATGTGTGTGCTACAAGGACAGAATGGTCCATATTTCTTCTATAAGGAATAGACATGCACCATCTTCTGCAGTAACACCACAACCAGAAATCTCTATCAGCACAACCACAAATGGTCTTGATGAATCAACCATAGAGTCATATGAGAAGCTAGTTCTTGGTGAGAGTAAAAGGCTTCCACCAGGTCCTAATGATGGAACTTGTTGGATATGTTTGTCAGAATATAACTCTAAAGAGACCATAAGATGCATACCTGAATGCAATCATTGCTTTCATTCTGAGTGTATTGATGAATGGCTTAGAATGAATAGCACTTGCCCTGTTTGCCGCAACACTCCTACTCCTTCACCTTCCCCTGCTCATCATCATCATCATCATCATAATGTGTCTGGTGACCCTTTGATTGGTTAA 1437 0.4189 MQTLDARHIELFLSEGYQNGNWEYQLVGSHDIKKRADGAAGAIFDVKHLEDSSTSAIFDYKSWIGRPNDWQPKAMIAFHAVAVNTNLQENEGINVKYQAMRAGTDGEVVSIRISQQLLDILIRFPFQLESDQNPYCGYPGFKLSCTNDSKTVLNLPFSGQFYVRKIDYLTQQIQLYDPDHCLPNRRLRLNLSGSPFTPTLSRDYTFFSCSTRNATTKQFVPIDCLSNSTSFVSAFPSVNLAANDPLPQSCSVIGNVSVPVSTSSYVGNISDELSQDLRLTWNKPNCRICESQGLMCGFESTTSDQVKCASDFQTGTSRGLIIFRIITLCIVGPASTFAIVMAICVCYKDRMVHISSIRNRHAPSSAVTPQPEISISTTTNGLDESTIESYEKLVLGESKRLPPGPNDGTCWICLSEYNSKETIRCIPECNHCFHSECIDEWLRMNSTCPVCRNTPTPSPSPAHHHHHHHNVSGDPLIG* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0184 478 ProSiteProfiles Zinc finger RING-type profile. 410 452 IPR001841 -
Aev02g0184 478 MobiDBLite consensus disorder prediction 455 478 - -
Aev02g0184 478 PANTHER RING-H2 FINGER PROTEIN ATL21A-RELATED 120 460 - -
Aev02g0184 478 SUPERFAMILY RING/U-box 404 458 - -
Aev02g0184 478 SMART ring_2 410 451 IPR001841 -
Aev02g0184 478 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 120 460 - -
Aev02g0184 478 Pfam Wall-associated receptor kinase galacturonan-binding 120 177 IPR025287 GO:0030247
Aev02g0184 478 Pfam Ring finger domain 409 452 IPR001841 -
Aev02g0184 478 Pfam Wall-associated receptor kinase C-terminal 229 309 IPR032872 -
Aev02g0184 478 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 371 457 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0184 Aev-Chr2 1343432 1347549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0184 120 457 C3H Transcription Factor Family AT2G25410 43.988 2.94e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0184 - - adu:107463372 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0184 02 1343432 1347549 Aev02g0184 02 1343432 1347549 ECH