Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0175 ATGAAGATTGAGGTGTGTTTTGGAGGAGGTGGTGGTTTTTGGAATGATGATGATGATGAAGAAGAGAAAGCTATGGCTGTGGAGGTTCTTGGAACACGAGCTATTGATTATTTGGTTGCAAATTCCTTAACCAATGAGACCATGTTAATGCCTCTTGGTGGTGGTGGTGAGAATCTTCAGAACATGCTCTCTGATCTTGTTGAACGACCCAACAAGTCCAATTTCAGCTGGAACTATGCAATTTTCTGGCAGATTTCACAGTCCAAGAATAACAGAGATTGTGTTCTTGGTTGGGGTGATGGGTGTTGTAGGGAACCAATGGAGGGTGAAGAAGAAGAAGAAGCTAGAAGAGGGAGTTTGAGACTTGGATTTGATGATGAGGTGAAACAAAGAATGAGGAAAAGGGTTTTGCAGAAGCTTCACAAGGTTTTTAATGGTGGTTCAGATGATGATAATGATGATGATTATAACTATGCTTTTGGGTTGGACCGAGTCACTGATACAGAGATGTTTTTTCTTGCTTCTATGTACTTCTCTTTCCCAAAGGGTCATGGTGGACCCGGAAAATGCTTTGAATCAGGTAATCACTTTTGGCTTTCTGGTGATGCTTTGAAATCTGGTTCTGATGATGATTACTGTGTTAGGTCATTCTTAGCTAGATCAGCTGCTTTTAGGACTGTTGTTTTGGTTCCTACTGATTTAGGTGTTGTGGAATTGGGTTCTGTGAGGATTGTTAGGGAGAGTCTTGAGTTGTTGCGTGCTGTGAAATCTGTGTTTTCGGCTAATAATAATAATGTTAAGTCTGCTATTTCGCCATTGGATTTGATGGATGAAACAAGAGATGGGAATGGACTCTTTTCCGGTTTGGCCATTGGGGATGGTAGTGATCATAGGCACAAAGGTGAGGGTGGTCCTAAGATTTTTGGGAAGGAACTGAATTGCCCGAATTCGGGTGCTAAACATTTTAGGGAGAAACTTGCTATTAGGAAAATGGAGGAGAGGCCTCAAAATAGCAGCATTGGATTTCCTAATGGTGGGAATGGTTTTAATGGTTTGAGTTTGGGAGCGAGTCAAGGTGTGAGGCAGGTTATTAGCCCTGCCGAAATTCATCCTCTAGGGCAGTCCAAAGTACCGAGGCTAGCCGGTGGCGCGAAGAGGGCTATTGTGGTTAGCAATTATCATCAATCACAAGAGGGGCAGGTGCCGATGCAAATTGATTTCTCAGGAGCCCCAGCATCAAGGACTTGTGTTAGATCATCAATTGCTGGTGAATCTGAGTTTACTGATGTTGAGGCCTTATGCAAGGAGGAGAAACCGGGCGCGGCCGGTGAGAGGAGGCCTAGAAAACGAGGCAGGAAGCCTGCTAATGGAAGGGAGGAACCTCTGAATCATGTGGAAGCAGAGAGGCAGAGGCGCGAGAAGCTGAACCAGCGTTTCTATGCGTTGCGCGCCGTCGTGCCAAACATCTCCAAGATGGATAAAGCATCCCTATTGGGAGATGCTATTTCTTACATCAATGAACTGCAGGAAAAACTCAAGGTCATGGAGTCTGAGAGGGAGAGATCATTAGGAAGCAATTCAAGACACGGATCAGCATTAGAAGCCGGCTTGAGAGCCGAAAATCATTGGAAATTTGCTTCTGATGTGGATGTTCAAGCTAACCGAGACGGCGTCGTTGTAAAGGTGAGTTGTCCTGTTGATGTTCACCCTGCTTCAAGAGTAATCCAAGCATTCAAAGATGCCGAATTGGGCATTGTAGAGTCCAAACTTGCTGCTGCAAATGATTCTGTTTTCCACACATTTGTGATCAAGTCACAAGATCATGAGAAGTTGACAAAGGAGAAGTTGATTACAGCATTTTCCAAAGAATCCAATTCCTTATTGCCATTATCATTATAG 1899 0.4402 MKIEVCFGGGGGFWNDDDDEEEKAMAVEVLGTRAIDYLVANSLTNETMLMPLGGGGENLQNMLSDLVERPNKSNFSWNYAIFWQISQSKNNRDCVLGWGDGCCREPMEGEEEEEARRGSLRLGFDDEVKQRMRKRVLQKLHKVFNGGSDDDNDDDYNYAFGLDRVTDTEMFFLASMYFSFPKGHGGPGKCFESGNHFWLSGDALKSGSDDDYCVRSFLARSAAFRTVVLVPTDLGVVELGSVRIVRESLELLRAVKSVFSANNNNVKSAISPLDLMDETRDGNGLFSGLAIGDGSDHRHKGEGGPKIFGKELNCPNSGAKHFREKLAIRKMEERPQNSSIGFPNGGNGFNGLSLGASQGVRQVISPAEIHPLGQSKVPRLAGGAKRAIVVSNYHQSQEGQVPMQIDFSGAPASRTCVRSSIAGESEFTDVEALCKEEKPGAAGERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYINELQEKLKVMESERERSLGSNSRHGSALEAGLRAENHWKFASDVDVQANRDGVVVKVSCPVDVHPASRVIQAFKDAELGIVESKLAAANDSVFHTFVIKSQDHEKLTKEKLITAFSKESNSLLPLSL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0175 632 MobiDBLite consensus disorder prediction 438 470 - -
Aev02g0175 632 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 59 259 IPR025610 -
Aev02g0175 632 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 459 508 IPR011598 GO:0046983
Aev02g0175 632 SMART finulus 465 514 IPR011598 GO:0046983
Aev02g0175 632 Pfam Helix-loop-helix DNA-binding domain 463 509 IPR011598 GO:0046983
Aev02g0175 632 Gene3D - 453 523 IPR036638 GO:0046983
Aev02g0175 632 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 1 625 - -
Aev02g0175 632 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 462 523 IPR036638 GO:0046983
Aev02g0175 632 CDD bHLH_AtAIB_like 456 521 - -
Aev02g0175 632 PANTHER MYC 1 625 IPR045084 GO:0003700|GO:0006355
Aev02g0175 632 MobiDBLite consensus disorder prediction 453 470 - -
Aev02g0175 632 Coils Coil 505 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0175 Aev-Chr2 1253731 1255629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0175 10 623 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 48.212 8.54e-180 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev02g0175 bHLH-MYC_N 1.7e-50 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0175 - - gmx:100807078 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0175 02 1253731 1255629 Aev02g0175 02 1253731 1255629 ECH
Aev06g1039 06 6947828 6949747 Aev02g0175 02 1253731 1255629 PCT