Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0174 ATGGAGCAACAACCTTCAACAACAACAACATCCGCCACCATCACAACCGCCACCACCTCCTCCGAAACCACCACCACAACCTCGCGCGTAAGCGGAACGCGCCACCCACTCTACCGCGGCGTCAGAAAACGCCGATGGGGAAAATGGGTCTCCGAAATCCGAGAGCCTCGCAAGAAATCACGCATATGGCTAGGCTCATTCCCTTCGCCGGAGATGGCGGCGAAAGCCTACGACGTCGCCGCTTACTGCCTCAAAGGCCGTAAGGCGCAGCTCAATTTCCCCGACGAGGTCCACCGCCTCCCGCCGCTCCCTCCGCCGTCGTCCCGCACCGCTCGTGACATCCAGGCCGCCGCCGCAAAGGCCGCTCACATGGCCGCCGTCACCTCCGCCGTGGAGGAGTCGCCGGAGAAGTGCAGCATTTCCGGCGACGGTGATGATGACTTTTGGGAGGAGATTGAGTTGCCGGAGCTGATGAACGATGGGTGGAGCTCCGCCGTGTGCGACGTTACGGCGTGGCCGGAACAACCGTTCACGGCGTGCCTATAG 546 0.6245 MEQQPSTTTTSATITTATTSSETTTTTSRVSGTRHPLYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPSPEMAAKAYDVAAYCLKGRKAQLNFPDEVHRLPPLPPPSSRTARDIQAAAAKAAHMAAVTSAVEESPEKCSISGDGDDDFWEEIELPELMNDGWSSAVCDVTAWPEQPFTACL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0174 181 MobiDBLite consensus disorder prediction 1 36 - -
Aev02g0174 181 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Aev02g0174 181 CDD AP2 36 95 IPR001471 GO:0003700|GO:0006355
Aev02g0174 181 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
Aev02g0174 181 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 181 - -
Aev02g0174 181 Pfam AP2 domain 36 86 IPR001471 GO:0003700|GO:0006355
Aev02g0174 181 MobiDBLite consensus disorder prediction 1 33 - -
Aev02g0174 181 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Aev02g0174 181 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Aev02g0174 181 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Aev02g0174 181 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Aev02g0174 181 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0174 Aev-Chr2 1237332 1237877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0174 7 179 AP2-EREBP Transcription Factor Family AT1G01250 57.471 6.25e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev02g0174 AP2 4.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0174 K09286 - gmx:100806544 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0174 02 1237332 1237877 Aev02g0174 02 1237332 1237877 ECH
Aev06g1040 06 6963307 6963888 Aev02g0174 02 1237332 1237877 PCT