Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0158 ATGAGGCCGGTTTTTGCTGGGAATTTGGAGTATGATACCCGTCAATCAGAGCTTGAGCGATTGTTCTCCAAGTATGGGAGGATTGACCGTGTTGACATGAAATCTGGTTTTGCTTTTGTCTATTATGAGGATGAGCGTGATGCTGAAGAAGCAATTCGTGCGCTTGACAATTTTCCATTTGGTTATGAAAAGCGAAGGCTGTCTGTGGAGTGGGCTAGGGGTGAACGTGGGCGCCATCGTGATGGCTCAAGAGCAAACCAGAGGCCCACAAAAACCCTATTTGTGATTAACTTTGACCCTCTTCGTACTAGGGTTCGTGACATAGAAAAACACTTTGAACCATATGGGAAGATTCATCATGTCCGAATCCGTAGGAACTTTGCATTTGTGCAGTTTGAAACACAAGAAGATGCTACTAAAGCTCTTGAGTGTACAAATATGAGTAAGATACTTGACAGGGTTGTGTCTGTGGAGTATGCTCTGAGGGATGATGGCGAGAGGGGTGACAATTATGACAGTCCTAGAAGAGGGGGATATGGCAGATCCCCTAGTCCAGCTTATCGCAGGCGACCGAGCCCTGACTACGGTCGTCCTCGCAGCCCTGTGTACGATAGGTATAATGGACCTGACAGGCGTAGGAGCCCCGAGTATGGCAGGCCAAGGAGCCCTGATTATGGCAGGCCAAGGAGCCCTGAATATGGCAGATACCGCAGGTATGCCGATCGCCAGTGCGAAGGTCAAGAACTTAAGCGAAGTGCAAATTTAGGGTAA 771 0.4838 MRPVFAGNLEYDTRQSELERLFSKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNFPFGYEKRRLSVEWARGERGRHRDGSRANQRPTKTLFVINFDPLRTRVRDIEKHFEPYGKIHHVRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGERGDNYDSPRRGGYGRSPSPAYRRRPSPDYGRPRSPVYDRYNGPDRRRSPEYGRPRSPDYGRPRSPEYGRYRRYADRQCEGQELKRSANLG* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0158 256 MobiDBLite consensus disorder prediction 164 256 - -
Aev02g0158 256 SMART rrm1_1 3 70 IPR000504 GO:0003723
Aev02g0158 256 SMART rrm1_1 92 158 IPR000504 GO:0003723
Aev02g0158 256 SUPERFAMILY RNA-binding domain, RBD 2 161 IPR035979 GO:0003676
Aev02g0158 256 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 5 204 - -
Aev02g0158 256 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATED 5 204 IPR029537 GO:0000398|GO:0005681
Aev02g0158 256 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 155 IPR000504 GO:0003723
Aev02g0158 256 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 60 IPR000504 GO:0003723
Aev02g0158 256 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 74 IPR000504 GO:0003723
Aev02g0158 256 Gene3D - 1 83 IPR012677 -
Aev02g0158 256 Gene3D - 84 173 IPR012677 -
Aev02g0158 256 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 162 IPR000504 GO:0003723
Aev02g0158 256 MobiDBLite consensus disorder prediction 204 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0158 Aev-Chr2 1129006 1131134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0158 4 164 Eukaryotic Initiation Factors Gene Family AT1G49760 24.725 2.34e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0158 K12893 - gmx:100797709 431.409