Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0148 ATGTTAGAGCATATGGAATATAGTTATTCAGCAGAAGATGCAGAGACATATAGCAACTCATCATCAATGATGAGGAGGAAGAAGAAGAAGAGTATGAACACAAGAAGGTTCAGTGATGAACAGATCAAGTCATTGGAATCCATGTTTGAAACAGAGTCAAGGCTTGAGCCTAGAAAGAAGCTTCAGCTTGCAAGGGAACTTGGGTTGCAGCCAAGGCAGGTTGCTATTTGGTTTCAGAACAAGAGGGCTCGATGGAAGTCTAAGCAATTGGAGAGAGATTACTCCATTCTCACCAACAGTTTCAACTCTCTCAATTCTAAGTTTGAAGCTCTCAAGAAGGAGAAGCAAGCATTATTAATACAGTTGCAGAAGCTGAATGATCTAATACAGAAGCCACTAGAAAAAGGTCAAAGCCATAATACACAAGCAAAAGGATCAAACAGCAATAATAATAATATGGAGAGTGAATCAGAAAATGGTGAGACAACAAAAAGTGAGGCTGATTTGAAGGCAAGCACATCATCAATAATGCAAACATCAACAAGAACAGAACATCATAATCATGATCATGATCATGCAGTACTTGGAAGTCTGTCAGATGATGACACAAGCATAAAAGTTGAGTATTTTAACAAGATGGAAGATGAACAAGGTGGACTATTGAGTTTTGCTGAGCATGGTGGTGATGGTTCCTTGACTTCACCAGAAGATTGGAGTACTTTTGACTCTGATCATATATTAGGCCAATCAACAAGTGATTACCAATGGTGGGACTTTTGGTCCTGA 786 0.3906 MLEHMEYSYSAEDAETYSNSSSMMRRKKKKSMNTRRFSDEQIKSLESMFETESRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLERDYSILTNSFNSLNSKFEALKKEKQALLIQLQKLNDLIQKPLEKGQSHNTQAKGSNSNNNNMESESENGETTKSEADLKASTSSIMQTSTRTEHHNHDHDHAVLGSLSDDDTSIKVEYFNKMEDEQGGLLSFAEHGGDGSLTSPEDWSTFDSDHILGQSTSDYQWWDFWS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0148 261 Gene3D - 16 98 - -
Aev02g0148 261 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7 6 261 - -
Aev02g0148 261 Coils Coil 101 128 - -
Aev02g0148 261 MobiDBLite consensus disorder prediction 135 197 - -
Aev02g0148 261 MobiDBLite consensus disorder prediction 135 158 - -
Aev02g0148 261 MobiDBLite consensus disorder prediction 166 181 - -
Aev02g0148 261 MobiDBLite consensus disorder prediction 1 37 - -
Aev02g0148 261 SMART HOX_1 28 92 IPR001356 GO:0003677
Aev02g0148 261 PRINTS Lambda-repressor HTH signature 59 68 IPR000047 GO:0003677
Aev02g0148 261 PRINTS Lambda-repressor HTH signature 68 84 IPR000047 GO:0003677
Aev02g0148 261 Pfam Homeobox associated leucine zipper 88 129 IPR003106 GO:0006355|GO:0043565
Aev02g0148 261 ProSitePatterns 'Homeobox' domain signature. 63 86 IPR017970 GO:0000981|GO:0006355
Aev02g0148 261 MobiDBLite consensus disorder prediction 182 197 - -
Aev02g0148 261 CDD homeodomain 35 89 IPR001356 GO:0003677
Aev02g0148 261 Pfam Homeodomain 35 86 IPR001356 GO:0003677
Aev02g0148 261 SUPERFAMILY Homeodomain-like 10 90 IPR009057 -
Aev02g0148 261 ProSiteProfiles 'Homeobox' domain profile. 28 88 IPR001356 GO:0003677
Aev02g0148 261 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 6 261 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0148 Aev-Chr2 1036741 1038032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0148 1 261 Homeobox Transcription Factor Family AT2G46680 46.494 1.88e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev02g0148 Homeodomain 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0148 K09338 - gmx:100811208 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0148 02 1036741 1038032 Aev02g0148 02 1036741 1038032 ECH
Aev06g1067 06 7134416 7135222 Aev02g0148 02 1036741 1038032 PCT