Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0122 ATGGAGAGGCTTCAACCACCCCTCAATTCATGTTTGTTTGGTGAGCATTTGGAAGTGAATTGTTTGGAGCAAAGTTTTGTGGATTATGCAGCAGAAAGCTTGAGATTTGATGAAGAAGAACAATTCTTGATATCTAGCTTAGAAGATAACATGCCATTTCTTCAGATGCTTCAGAGTGTTGAATATTCACAACAACAACAACAACAACAATGCTTCTTCAATCTCAAAGAACCAACCTTTCAAACTCTTCTTAGGCTTCAACACATGAAGAATCATCATCAAAACCATAACTATAATCATAATCATGACAATAACATTATTAACAATAATGTTCATCAAGCAGCAACTGAAGCAGCACTTGAGAGTTGTGTGACACATGACATGGTTGAGATGCACTCACATTATTCACATTCACCAGTGAAATCTGAGAGCTATGAGCTTCAACAACAAAACCAAGTTCATCAAAATTCAACCTTTTCTTCATCTGTTATTGAGAACAAGGTGATGAGCTATGAGTGCAACCAGGAACAGACAAAAACAACAGAACAAGCTGAAAACAACAACAACAAAACAGAACAAGGTTGTTCTAACAAATCTCAGTTAAATGCTGCTATAAAGGGAGAAAAGAGGAAGAGGAAGAGAACAAGACCAGCAAAAAACAAAGAAGATGTTGAGAATCAAAGAATGACTCACATTGCTGTTGAAAGGAACAGGAGGCGCCAAATGAATGACCATCTCAGTGTTCTAAGGTCCCTTATGCCTCCTTCATACATTCAAAGGGGGGACCAAGCTTCAATAATTGGGGGTGCAATTGATTTTGTGAAAGAGTTGGAGCAATTGCTTCAATCCCTTGAAGCACAGAAAAGGGTGAGAAATATTAATAGTAATAATAATGAAGAGGTTGGTTTTGGCTCTAATAACTTGTGTATTAAGCCATCAATAAGAACAATAATGCAAATGCAAAGCTATGGAATGAGGTCATCATCATCATCACCAACAAGTGAAGAGGAAAAATGTAATGGTAATAGTGATGTGGTTAACGCAGAAAATAAGTCAGGTTCAGCAGAAATTGAGGTAACATTGATTCAAACACATGTGAACTTGAAAATCCAATGTCAAAGGAAACAAGGCCAATTGGTAAAAGCTATTGTTGCTTTGGAAGATCTTAGGCTATCAATTCTGCATCTCAACATTACCTCCTCTCTGGATTCTGTACTCTACTCTCTCAATCTCAAGATTGAAGAAGGGTGTAAGCTAAGCACAGCAAATGAGATAGCAGAAGCAGTTCACCATATATTCAACTTCATTAATGGTTAG 1317 0.3713 MERLQPPLNSCLFGEHLEVNCLEQSFVDYAAESLRFDEEEQFLISSLEDNMPFLQMLQSVEYSQQQQQQQCFFNLKEPTFQTLLRLQHMKNHHQNHNYNHNHDNNIINNNVHQAATEAALESCVTHDMVEMHSHYSHSPVKSESYELQQQNQVHQNSTFSSSVIENKVMSYECNQEQTKTTEQAENNNNKTEQGCSNKSQLNAAIKGEKRKRKRTRPAKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLLQSLEAQKRVRNINSNNNEEVGFGSNNLCIKPSIRTIMQMQSYGMRSSSSSPTSEEEKCNGNSDVVNAENKSGSAEIEVTLIQTHVNLKIQCQRKQGQLVKAIVALEDLRLSILHLNITSSLDSVLYSLNLKIEEGCKLSTANEIAEAVHHIFNFING* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0122 438 Coils Coil 274 294 - -
Aev02g0122 438 Gene3D - 217 294 IPR036638 GO:0046983
Aev02g0122 438 PANTHER TRANSCRIPTION FACTOR BHLH70 23 437 - -
Aev02g0122 438 MobiDBLite consensus disorder prediction 178 203 - -
Aev02g0122 438 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 226 277 IPR011598 GO:0046983
Aev02g0122 438 PANTHER MAX DIMERIZATION, MAD 23 437 - -
Aev02g0122 438 MobiDBLite consensus disorder prediction 178 224 - -
Aev02g0122 438 CDD bHLH_AtFAMA_like 229 294 - -
Aev02g0122 438 Pfam Helix-loop-helix DNA-binding domain 227 278 IPR011598 GO:0046983
Aev02g0122 438 SMART finulus 232 283 IPR011598 GO:0046983
Aev02g0122 438 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 226 291 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0122 Aev-Chr2 769315 771911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0122 219 438 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 53.846 2.05e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev02g0122 HLH 4.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0122 - - adu:107473071 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0122 02 769315 771911 Aev02g0122 02 769315 771911 ECH