Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0111 ATGGAGCTGATTCAGCCACAAGAACAACAAGAAGCTAATAATAATAATAGCAGAGAAGAATTGGAAGAAGAAGAGGAGGAAGCAGAAGCAGAAGAATTAGAAGAAATCATCACAAGAGAAGAAGATCAAAGCACCACCACCATAACAAGGTTACACCATCATCAAGATGCTACATCCTCCTCCAATTTCATCAACCACAACACAACATCATCAAGGAATAAGCAACAACTAGAGTTCATGGACTTGTCACTTGGAACAATTACAACCACCATTGCCGCCGCCACCACCACCAACAATTTCCAAGGATCATCATTAAGCCATTATGCCAACAACAACAACATTAATCATAACAACAACAATAGTAATAGCAATCATCATCATCAAGAAGGAGGAGGAATAGGGAGTAGTGTTGGAGAGAAAGAGCACATGTTTGACAAAGTAGTGACACCAAGTGATGTAGGGAAGTTGAACAGGCTAGTGATTCCCAAGCAGCACGCAGAGAAGTACTTCCCTCTCGACTCGAGCTCCAATGAGAAAGGGCTGCTTCTCAATTTCGAGGACAGGAATGGGAAACTGTGGCGGTTCAGGTACTCTTACTGGAACAGCAGCCAGAGCTATGTGATGACCAAAGGCTGGAGCCGTTTTGTTAAGGAGAAGAAGCTTGAAGCTGGTGACATTGTCTCATTCCAACGCGGTGTTGGTGATTTGTTTAGACATCGATTGTTCATTGATTGGAGGCGAAGACCCGAACATCATCATCATCATCACCATCCTCTTCATCATCCTCCTTTTTTCGATTACAACGCTTCTACAACACTCATCTCGCCTTTTTTCCTTCCAAATCATCATCATCAACAACAACAATTTTCACCATCAATTAGATGGGGTGGTGGTGGTGGAAGATTGTATTCATCATCATCAACACCTTCTCAGCCTTCGCCACAGCTGCCGCCACAATCACAACAACACTTGATTCATCATCAACAGCATCAGCAGCAGCAACAATTCAGTTACAACAACATGTACCCTTTTCATCACTATCATCAACCGCAACCGCAACCACAACCGCAACAACACTACGGAGTTGGTTACAATAGTAGTAGTAATGAGGAGGTGAATGTTTCATCAGGTGGTGGTGGTGGTGGTGGTTCAGTGTATTACCTGAGGTCAATCTCTGGTACAACAAGGCAACAACAACAAGAGGGAGGGAATAATAATGACAATATTGCCCCTATGATGATAATTGATTCTGTTCCAATTTCTCATCACCAAAAGAATCATAATCAATATGGTGGTGGTAGTAATAGCAATGCAGGAGGGAAAAGGTTAAGGCTATTTGGTGTGAACATGGAATGTGCTTCTTCAACCACAACGCCACAACAAGAACAAACACTTCAATTTCTCAAGAATCTACCTCCTCATCATCATAATGAAGATTCAACAGCAACAAAATTCAATGTTTTTGATTTGGACCCTTCTTTGCAATATCATCATCATCAGTAA 1503 0.4192 MELIQPQEQQEANNNNSREELEEEEEEAEAEELEEIITREEDQSTTTITRLHHHQDATSSSNFINHNTTSSRNKQQLEFMDLSLGTITTTIAAATTTNNFQGSSLSHYANNNNINHNNNNSNSNHHHQEGGGIGSSVGEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLEAGDIVSFQRGVGDLFRHRLFIDWRRRPEHHHHHHHPLHHPPFFDYNASTTLISPFFLPNHHHQQQQFSPSIRWGGGGGRLYSSSSTPSQPSPQLPPQSQQHLIHHQQHQQQQQFSYNNMYPFHHYHQPQPQPQPQQHYGVGYNSSSNEEVNVSSGGGGGGGSVYYLRSISGTTRQQQQEGGNNNDNIAPMMIIDSVPISHHQKNHNQYGGGSNSNAGGKRLRLFGVNMECASSTTTPQQEQTLQFLKNLPPHHHNEDSTATKFNVFDLDPSLQYHHHQ* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0111 500 MobiDBLite consensus disorder prediction 107 137 - -
Aev02g0111 500 Coils Coil 7 43 - -
Aev02g0111 500 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 76 473 IPR044800 GO:0003700
Aev02g0111 500 MobiDBLite consensus disorder prediction 107 130 - -
Aev02g0111 500 MobiDBLite consensus disorder prediction 317 375 - -
Aev02g0111 500 CDD B3_DNA 142 231 IPR003340 GO:0003677
Aev02g0111 500 Gene3D - 137 258 IPR015300 -
Aev02g0111 500 MobiDBLite consensus disorder prediction 50 68 - -
Aev02g0111 500 SMART B3_2 144 249 IPR003340 GO:0003677
Aev02g0111 500 MobiDBLite consensus disorder prediction 18 38 - -
Aev02g0111 500 Pfam B3 DNA binding domain 144 248 IPR003340 GO:0003677
Aev02g0111 500 MobiDBLite consensus disorder prediction 1 68 - -
Aev02g0111 500 MobiDBLite consensus disorder prediction 288 381 - -
Aev02g0111 500 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 76 473 - -
Aev02g0111 500 ProSiteProfiles B3 DNA-binding domain profile. 144 249 IPR003340 GO:0003677
Aev02g0111 500 SUPERFAMILY DNA-binding pseudobarrel domain 140 250 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0111 Aev-Chr2 673751 675463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0111 383 458 RAV Transcription Factor Family AT2G46870 34.211 3.53e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev02g0111 B3 1.4e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0111 - - lja:Lj3g3v2520080.1 342.428