Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0109 ATGGCTAGAAACACAGTTCCAATACATGAATTCATGCCAGTTGGATTCAGGTTCAGGCCTAAAGATGAAGAGCTTGTGAACCACTACCTCAAGAACAAGCTTCAGGGTCATGAATTCCCTGTCCTTGTTGTCCCTGACATTGATCTTTGCAAGGTTGAGCCTTGGGACATACCAGATATTGTGATAGCAGCATCAGATATAAAACCAGATGACCCTGAATGGTTCTTCTTCAGTCAACGTGATTACAAGTATGCAAGGAGCACAAGGTCAAACAGGTCAACAGAACATGGGTACTGGAAAGCCACAGGACAAGACAGGAAAATCATGGAAAGGGGAACCAACAATGTGATTGGTGCAAAGAAGACACTTGTTTTCTATAAGGGTCGAAGTCCTAAAGGTGTCAAGACCAATTGGGTTATCCATGAATATCATGCAACTACCTTTGATGTTAGCCAGAGGACTTTTGTTTTGTGTCGATTAATGAAGAAACCGGAGAAGAAAGCCGAAGGGGAAACTTATCCAGTAGCCTATGATGAAGGAGAGCCTAGTGGCAACATTGTTTCTGACTATGAAAATCAAGAAACAGAAGAAAGAATTACAAGTGTATGTAATTCTCCCAAAATGGATATTGATTCAATCTTCCAACCACTTCAGGCCGGATCGTTACAGCATTCACCGGTTGGCTTTGAGCAAGAACCATCCTTCCAAGTCTCCCCATATCTCAACTCCTATCTTGGAAATGAAACTAGCAGCAGGCAAAGTCCATTTGAAACTACTGAAGAGGAGGTTTATGCTAATGAGTTTGCAAATTCTGTCCTGGCTGATGGGAACTTGGTCGCCGGCGAAGGAAGAGCACACGCCTTCATGGTTAGTTCAGCTCAGTCAGAGTCATTGACAAGGGTACACCACGAAAGCAGCGACACGGATGCTGAAGTAGCCTATGCACAGTATGGCAATGTTGTGGATACTTCAACATTGTGCAATGAACATGCTAGTTCAAGGGACTACCCTGCATCAAAAATGGTTCAATCATTGCATCATTTTGTCCATGGTGGAACACATACTCTATCATCTAACCGAGAAGCGCGAAAAGAGAAGAAGGAGAGCATGATTCAAAATGATTTCTATGGAGTGGAGACATCCTCTAGTGACTCAACTGCTGATAAACATTTTGAGATCAATTTTGTAGAAATTTCTAGTCCTCCTCACAGTCTAAGGAGATGGAAGAATCAATATCAACCCGGACCGCACAACTCTGCATCATCACAAAAAGTTGCTGCAAGAAGATGTCAAACACTGAGGAAGGTTTCAAGCAATGCGGTATCGCGCCTTAAGGATAAGAAGGAACCAGCTATTGTGGAATCATCAGAAAAGGATCAGAACACAAAAACCAGTTCTGATGTTAATGGAAGAAGCAGTTATTTCATCTGCTCGGCGATGCCTTCGTCATCAAGGCAAAGCGTATTTCCGCGATCGGTATATCTTGTCAATGTAATCATAGGGATTCTGTTGTTTATAGCCATTAGTTGGGAAGTGTTATCATGTTAG 1548 0.4257 MARNTVPIHEFMPVGFRFRPKDEELVNHYLKNKLQGHEFPVLVVPDIDLCKVEPWDIPDIVIAASDIKPDDPEWFFFSQRDYKYARSTRSNRSTEHGYWKATGQDRKIMERGTNNVIGAKKTLVFYKGRSPKGVKTNWVIHEYHATTFDVSQRTFVLCRLMKKPEKKAEGETYPVAYDEGEPSGNIVSDYENQETEERITSVCNSPKMDIDSIFQPLQAGSLQHSPVGFEQEPSFQVSPYLNSYLGNETSSRQSPFETTEEEVYANEFANSVLADGNLVAGEGRAHAFMVSSAQSESLTRVHHESSDTDAEVAYAQYGNVVDTSTLCNEHASSRDYPASKMVQSLHHFVHGGTHTLSSNREARKEKKESMIQNDFYGVETSSSDSTADKHFEINFVEISSPPHSLRRWKNQYQPGPHNSASSQKVAARRCQTLRKVSSNAVSRLKDKKEPAIVESSEKDQNTKTSSDVNGRSSYFICSAMPSSSRQSVFPRSVYLVNVIIGILLFIAISWEVLSC* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0109 515 Gene3D NAC domain 21 168 IPR036093 GO:0003677|GO:0006355
Aev02g0109 515 ProSiteProfiles NAC domain profile. 12 163 IPR003441 GO:0003677|GO:0006355
Aev02g0109 515 MobiDBLite consensus disorder prediction 446 468 - -
Aev02g0109 515 Pfam No apical meristem (NAM) protein 13 144 IPR003441 GO:0003677|GO:0006355
Aev02g0109 515 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 431 - -
Aev02g0109 515 SUPERFAMILY NAC domain 8 163 IPR036093 GO:0003677|GO:0006355
Aev02g0109 515 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 11 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0109 Aev-Chr2 657949 660474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0109 10 360 NAC Transcription Factor Family AT4G35580 35.075 1.41e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev02g0109 NAM 2.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0109 - - adu:107473112 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0109 02 657949 660474 Aev02g0109 02 657949 660474 ECH