Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0099 ATGAGTACTATGATGAACAGCAACAACATTGGACAATTTGGGGATACGAGTCTGACGAAGGTGTTTGTAGGAGGGCTAGCATGGGAGACTCCGAAGGAAGCACTGAGGCAACACTTTGAGAAGTACGGTGACATCCTTGAAGCTGTCATCATCTCCGACAAGCTCACTGGCAGATCCAAAGGCTACGGCTTTGTGACATTCAAGGAAGCAGAGGCAGCGAAGAAGGCATGCGAGGAGCAAGAAGGTCTGATCATCAATGGGCGCAGAGCAAACTGTAATCTTGCTTCCCTTGGAGCTCGTCGCCCAAGCTCTACTTCTTCTCCTCGCACTGCTAATTCTAATTCACCACCAAAAGAAGTATCAAACGGTGGAGGAGCAGTTAGGAACAACGGATCAAGCACAGCACCACCATTATTATCAGCTGCTGCTAATAATAATAATAATAATAATAATAATAATAATCAAGTGCAGTGGTATTATCCTGTGGGGACACATAATGCATCGCCATTCCATCCTCCTCCTCCTCACGCCATTCCTTATTATGGGTACACACCGACCTACATTGCAACAACAGACTTAAATTACAATTACAATTATAATTACAATTACAATCAGAAGCTGAGCTACGGTGGGGCCTACATGAGTGGTGGGCACCACTACTACCCCCATGTGTACCCGAGGCATGCTATGGTGGGTGCCAACACACTGATGCCCATGTACCCTCTCTATCACTATCACCATCATCCAACGGAGACCATGGGCGTTCCTGCTCACTACTATCATCCAACGGCAGGGCATTACGCTCCAGTGCCAGCTGGCATCGTATCCAAGCCCGTGTCCATTACTCCTCACACAGGTACAGTTGGTGTTGAATGCTTTAAGGCTGTTGTGTGA 894 0.4732 MSTMMNSNNIGQFGDTSLTKVFVGGLAWETPKEALRQHFEKYGDILEAVIISDKLTGRSKGYGFVTFKEAEAAKKACEEQEGLIINGRRANCNLASLGARRPSSTSSPRTANSNSPPKEVSNGGGAVRNNGSSTAPPLLSAAANNNNNNNNNNNQVQWYYPVGTHNASPFHPPPPHAIPYYGYTPTYIATTDLNYNYNYNYNYNQKLSYGGAYMSGGHHYYPHVYPRHAMVGANTLMPMYPLYHYHHHPTETMGVPAHYYHPTAGHYAPVPAGIVSKPVSITPHTGTVGVECFKAVV* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0099 297 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 97 IPR000504 GO:0003723
Aev02g0099 297 SMART rrm1_1 20 93 IPR000504 GO:0003723
Aev02g0099 297 PANTHER RNA-BINDING PROTEIN ARP1-RELATED 3 288 - -
Aev02g0099 297 MobiDBLite consensus disorder prediction 97 153 - -
Aev02g0099 297 PANTHER GEO13361P1-RELATED 3 288 - -
Aev02g0099 297 MobiDBLite consensus disorder prediction 96 153 - -
Aev02g0099 297 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 21 89 IPR000504 GO:0003723
Aev02g0099 297 CDD RRM_RBM24_RBM38_like 19 95 - -
Aev02g0099 297 Gene3D - 5 111 IPR012677 -
Aev02g0099 297 SUPERFAMILY RNA-binding domain, RBD 12 113 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0099 Aev-Chr2 587680 590988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0099 15 96 C2H2 Transcription Factor Family AT2G19380 45.122 2.38e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0099 - - lang:109337745 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0099 02 587680 590988 Aev02g0099 02 587680 590988 ECH