Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev02g0092 | ATGGAAATTTCATTCTCTCCTCAGCTTTTGCATCAACAACAACAACAAGAGGGAAGCCACAACAACTACATGATGACCAACATCCTCATCATTTTCCTCACATCAATTGCTTTTGTGGCAAACTCATTCAAAAAGCAATATGCTAAGGAGGCAGAGCAACCTCATGGTGATGATGAAGAAAGTAGTGATGATTCTTATTGTTCTGTGTGTCTAAGCCAATTTTGCAAAGGGGAAAAACTTAGGATTCTTCCAATTTGCAACCACAGGTACCATTCTGATTGTATTGCTGCTTGGTTGAAGAATCACACTACATGTCCTCTTTGTAGGAACAACATCATTGACCACCATGTCTCAGACAATAGTAATCAGCACAAGTTTTTACATGTCAAGCAATTTAAAGAGTCTATGATTGGTGTCTTGCTAGGTTTCTCTGATTTGTTGGTAGGGGTTGTTTACATGATGCTTCCAACTACTATAAGAGAGACTTTCCCTTTGGTTCATTGA | 504 | 0.3869 | MEISFSPQLLHQQQQQEGSHNNYMMTNILIIFLTSIAFVANSFKKQYAKEAEQPHGDDEESSDDSYCSVCLSQFCKGEKLRILPICNHRYHSDCIAAWLKNHTTCPLCRNNIIDHHVSDNSNQHKFLHVKQFKESMIGVLLGFSDLLVGVVYMMLPTTIRETFPLVH* | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev02g0092 | 167 | ProSiteProfiles | Zinc finger RING-type profile. | 67 | 109 | IPR001841 | - | |
Aev02g0092 | 167 | Pfam | Ring finger domain | 66 | 109 | IPR001841 | - | |
Aev02g0092 | 167 | CDD | RING-H2_PA-TM-RING | 67 | 109 | - | - | |
Aev02g0092 | 167 | SUPERFAMILY | RING/U-box | 58 | 115 | - | - | |
Aev02g0092 | 167 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 38 | 116 | IPR044675 | - | |
Aev02g0092 | 167 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RING1-RELATED | 38 | 116 | - | - | |
Aev02g0092 | 167 | SMART | ring_2 | 67 | 108 | IPR001841 | - | |
Aev02g0092 | 167 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 36 | 114 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev02g0092 | Aev-Chr2 | 543235 | 543738 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev02g0092 | 55 | 112 | C3H Transcription Factor Family | AT1G53010 | 50.847 | 1.21e-16 | 71.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev02g0092 | - | - | gmx:100500375 | 157.918 |