Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0092 ATGGAAATTTCATTCTCTCCTCAGCTTTTGCATCAACAACAACAACAAGAGGGAAGCCACAACAACTACATGATGACCAACATCCTCATCATTTTCCTCACATCAATTGCTTTTGTGGCAAACTCATTCAAAAAGCAATATGCTAAGGAGGCAGAGCAACCTCATGGTGATGATGAAGAAAGTAGTGATGATTCTTATTGTTCTGTGTGTCTAAGCCAATTTTGCAAAGGGGAAAAACTTAGGATTCTTCCAATTTGCAACCACAGGTACCATTCTGATTGTATTGCTGCTTGGTTGAAGAATCACACTACATGTCCTCTTTGTAGGAACAACATCATTGACCACCATGTCTCAGACAATAGTAATCAGCACAAGTTTTTACATGTCAAGCAATTTAAAGAGTCTATGATTGGTGTCTTGCTAGGTTTCTCTGATTTGTTGGTAGGGGTTGTTTACATGATGCTTCCAACTACTATAAGAGAGACTTTCCCTTTGGTTCATTGA 504 0.3869 MEISFSPQLLHQQQQQEGSHNNYMMTNILIIFLTSIAFVANSFKKQYAKEAEQPHGDDEESSDDSYCSVCLSQFCKGEKLRILPICNHRYHSDCIAAWLKNHTTCPLCRNNIIDHHVSDNSNQHKFLHVKQFKESMIGVLLGFSDLLVGVVYMMLPTTIRETFPLVH* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0092 167 ProSiteProfiles Zinc finger RING-type profile. 67 109 IPR001841 -
Aev02g0092 167 Pfam Ring finger domain 66 109 IPR001841 -
Aev02g0092 167 CDD RING-H2_PA-TM-RING 67 109 - -
Aev02g0092 167 SUPERFAMILY RING/U-box 58 115 - -
Aev02g0092 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 38 116 IPR044675 -
Aev02g0092 167 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-RELATED 38 116 - -
Aev02g0092 167 SMART ring_2 67 108 IPR001841 -
Aev02g0092 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 114 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0092 Aev-Chr2 543235 543738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0092 55 112 C3H Transcription Factor Family AT1G53010 50.847 1.21e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0092 - - gmx:100500375 157.918