Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0086 ATGACCACCAAAATCAAACAAGCCTTCACCGGAATCACCGATTCCGGCATCAACAACAAGAAGAAGAAGCTCCTCATATCCCTCTTCGCCACCATCCTCCTTATCACCGCCATAGTAGCCATAGCAGCAGGAGTAAAAAACTCCCAAAAAAACAAAACCTCATCATCATCATCATCTTCTTCAGCTTCATCACTCTCACTCTCACACCACTCCCACACAATAATCAAAACGGCATGCAGCTCCACATTATACCCTGAGCTCTGTTTCTCCGCCGTAGCCTCAGAACCAGGCGTGACAAACAGAGTCTCATCGCACAAGGACGTAATCGAGATCTCGCTCAATGTCACAACCAGAGCCGTTGAACATAACTACTTCACCATAGAGAAGTTGATCGAAAAGAGGCAAAAGAGTCTCACTGAGAGGGAGAAGACTGCGCTACATGATTGCCTTGAAACCATTGATGAAACACTCGATGAGCTCAGACAAGCACATGAGGATCTTAAACTCTATCCCAATTCTAACAAGAAGACGCTCTATCAGCACGCTGATGACCTCAACACGCTCATCAGCGCCGCCATAACCAACCAGGTGACTTGCTTGGACGGTTTTTCTCACGATAGCGCGGACAAGAAGGTTCGGAAGGTTCTAGAACAAGGTCAGGTTCACGTGGAACGCATGTGCAGCAACGCATTAGCAATGACGAAGAACATGACCGACTCTGACATTGCAATCTACGAGCAGAAGATGAACATTAAGAATGGATCAGGAATCAGGAAATTGATGATGGAAGAGCAATTTGACGAAGCTGGAATCCGGTGGCCGGAGTGGATCTCTGCGGCGGATCGGAGGCTCCTCCAGTCGTCCACGGTGAAGGCCGACGTGGTCGTGGCGGCCGATGGGAGCGGGAATTTTAAGACGGTTTCTGCGGCTGTGGCGGCGGCGCCGGTGAAGAGTAGCAAGCGGTTTGTGATTAAGATTAAGGCTGGGGTGTATAGGGAGAATGTGGAGGTTCCTAAGAAGAAGAGTAATATAATGTTCTTGGGTGATGGAAGGACTAACACTATTATCACTGCTAGCAGAAATGTTAAAGATGGAAGCACCACATTTCACTCTGCCACTGTTGCTGTAGTGGGTGGAAACTTCTTGGCTAGAGACATAACATTCCAGAACACAGCAGGGGCATCAAAGCACCAAGCAGTGGCACTAAGAGTAGGTGGTGACCTCTCAGCATTCTATAACTGTGACATCTTAGCATACCAAGACACACTCTATGTCCACAACAACCGCCAATTCTTCATCAACTGCCTAATCTCAGGCACAGTTGATTTCATCTTTGGAAATTCCGCAGTTGTCTTCCAAGACTGTGACATCCATGCCAGAAAGCCAGACCCTGGCCAGAAGAACATGGTCACTGCACAGGGCAGGGTTGATCCAAACCAGAACACAGGCATTGTGATCCAGAAATGCAGGGTTGGTGCCACAAAGGATTTGGAGCCTGTGAAGAAGAGCTTCCCTACTTATCTTGGTAGGCCTTGGAAGGAATACTCTAGGACTGTGTTTATGCAGTCCACAATCAGTGATGTTATTGACCCTGTTGGGTGGCATGAGTGGAATGGTAATTTTGCATTGAACACTTTGGAGTATAGGGAGTATCAGAATTCTGGGCCTGGTGCTGGCACTTCTGGGAGGGTTAAGTGGAAAGGGTATAAGGTTATTACTAATGCTGCTGAGGCCCGGGCTTTCACTCCTGGCACTTTCATTGGAGGCTCTAATTGGTTGGGCTCTACTGGCTTCCCTTTCTCTCTTGGCTTGTAA 1815 0.4804 MTTKIKQAFTGITDSGINNKKKKLLISLFATILLITAIVAIAAGVKNSQKNKTSSSSSSSSASSLSLSHHSHTIIKTACSSTLYPELCFSAVASEPGVTNRVSSHKDVIEISLNVTTRAVEHNYFTIEKLIEKRQKSLTEREKTALHDCLETIDETLDELRQAHEDLKLYPNSNKKTLYQHADDLNTLISAAITNQVTCLDGFSHDSADKKVRKVLEQGQVHVERMCSNALAMTKNMTDSDIAIYEQKMNIKNGSGIRKLMMEEQFDEAGIRWPEWISAADRRLLQSSTVKADVVVAADGSGNFKTVSAAVAAAPVKSSKRFVIKIKAGVYRENVEVPKKKSNIMFLGDGRTNTIITASRNVKDGSTTFHSATVAVVGGNFLARDITFQNTAGASKHQAVALRVGGDLSAFYNCDILAYQDTLYVHNNRQFFINCLISGTVDFIFGNSAVVFQDCDIHARKPDPGQKNMVTAQGRVDPNQNTGIVIQKCRVGATKDLEPVKKSFPTYLGRPWKEYSRTVFMQSTISDVIDPVGWHEWNGNFALNTLEYREYQNSGPGAGTSGRVKWKGYKVITNAAEARAFTPGTFIGGSNWLGSTGFPFSLGL* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0086 604 ProSitePatterns Pectinesterase signature 2. 437 446 IPR033131 -
Aev02g0086 604 Gene3D - 286 604 IPR012334 -
Aev02g0086 604 SMART PMEI_2 70 233 IPR006501 GO:0004857
Aev02g0086 604 CDD PMEI-like_3 77 238 - -
Aev02g0086 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 238 IPR035513 -
Aev02g0086 604 PANTHER PECTINESTERASE 19 603 - -
Aev02g0086 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 238 IPR035513 -
Aev02g0086 604 Pfam Plant invertase/pectin methylesterase inhibitor 74 233 IPR006501 GO:0004857
Aev02g0086 604 Pfam Pectinesterase 293 589 IPR000070 GO:0030599|GO:0042545
Aev02g0086 604 TIGRFAM PME_inhib: pectinesterase inhibitor domain 57 237 IPR006501 GO:0004857
Aev02g0086 604 PANTHER PECTINESTERASE 19 603 - -
Aev02g0086 604 SUPERFAMILY Pectin lyase-like 288 603 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0086 Aev-Chr2 498792 504485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0086 55 604 Carbohydrate Esterase AT3G14310 71.658 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0086 K01051 - pvu:PHAVU_010G123100g 912.909