Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0078 ATGTTTCAGTTTCATACTCAAGGAGTTCAGAAGCAGAGTAGTTGTACTCTGCTTGCTGTTACATGTAGTAGTGGCTTTGAGCAGAAGAAGCCACAACAGAATCTGCTCAATTACCCTTTCCCTGACCTTGTTTCTGCTGGGCGTCTTGAGGTTCAAGTTCTGACCAATCCCGAGAAGGAGCAGTTTCGGAAAGTTCTGGATTCATATCAACCAAATATTGTTTACTTACAAGGAGAACAGCTTGACAATGGTGAAGTTGGTCCATTGGTTTGGCAGGGTATGGAATTATCCACCCCTGAAGATATAACAGAGCTTTTTGGTCCAACATTGCCGACTGCTGTTTATTTGGAAATCCCAAATGGAGAAAGTTACGCAGAGGCTCTTCATGAGAAGGGAATCCCATATGTTATATTTTGGAAAAATGCTTTTTCCTGCTATGCTGCCTGCCATTTTCGTCAAGCTTTTCTTTCGGTGGTGCAGAGTTCATCAACACATACATGGGATGCTTTCCATCTTGCACGTGCCTCTTTTGAGTTATACTGTGTTCAAAACAACGAAGTACTTCCTGCTGACAACCATGAAGCTGATAGTGAGATGGGACCACACCTTCTGGGAGACACACTCACAATTAATGTTGATCCTCCTGAGATGGCTGAAGAAGATGATGATGAAGGTTCCTTAGGTGGTCTTCCTGCTATTAAGATACATGATGATGAAGTGAACTTGAGATTTCTCATCTGTGGTGCGCCTTCTGCTGTTGATGAGTCAATGCTAAGATCTTTGGAGGATGGACTCAGTGCTCTCCTAACTATAGAAATACGGGGTTGCAAGCTCCATGGCAAGTTTAGTGCACCCCCGCCACCGCTTCAAGCAGCTTCTTTTTCTCGTGGAGTTGTGACCATGCGATGTGATCTATCAACCTGTAGTTCTACTCATATCTCCCTTCTGGTATCAGGCAGTGCACAAACTTGTTTTAATGATCAGCTCTTGGAGAATCATATAAAAAATGAGATAATTGAGAACAGTCAACTAGTTCGTGCACAACTAAACAATGAGGGGAACATCAACAAACAGAATGTCTCCGAACCTCGCAGATCTGCTTCAATTGCTTGTGGAGCAAGTGTATTTGAAGTTTGCATGAAGCTTCCTCAGTGGGCTTTACAGATTTTGAGACAGCTAGCACCCGATGTTTCTTATCGAAGTTTAGTTGCACTTGGCATTGCTAGTATTCAGGGGCTGCCTGTAGCTTCTTTTGAGAAAGATGATGCTGAGCGCTTACTATTTTTCTATCAAAGCTCTGAGAAAGATAGCTTGACAAACAATATAAATTTCAGCAGCCCCCCTGGTTGGTTGAAACCACCCCCTCCTACTAGAAAGAGGTGTGATCCAAGTCAAGAGGCTAGTCCTGGCCTTCATGACGGTGTTTTTGCAGAGCAGGGTGCTGCTCGAAAAGTAGATGAAAAAGACAAGGACAGAAAAATGGAAAACGGGATTAGCACACCTTTAACTCCAGCTAGGCAGAGATTAAAAGTGTCAGCCATGAGGCCAATTCCTCATGTTCGTCGCCATAGAATGACACCTTTTTGTGCTTCTGAGGCAAATGGTTTTGATGGTGGCCATGTTGAGGCTAATTTGCCACTTGTTGCCCCAACAAAACGAAGTAGCATCGGGTCAAGTTCTGCAACACAGAGAAAATCATTTTCAGGCTCAGCTCAGTCTAAGCAGGTTATTTCGCTGAACCCATTGCCTTTGAAGAAACATGGCTGTGGCAGAGGCCCGGTACAAACTTGCTCCGAGGAGGAATTTCTTAAAGATGTCATGGAGTTTTTGATTATTCGGGGACACACTCGATTGATTCCTCAAGGAGGGCTTGCTGAGTTCCCTGATGCCATACTCAACGGAAAACGCCTTGATCTCTACAACTTGTATAAAGAGGTGGTTACCAGGGGAGGATTTCATGTTGGTAATGGCATCAACTGGAAGGGTCAAATCTTCTCAAAGATGCGCAATTACACAACCACCAACAGAATGACTGGAGTTGGAAATACACTTAAGAGACACTACGAAACCTATCTTTTAGAATATGAATTAGCACATGATGATGTGGATGGAGAGTGCTGCTTGCTGTGTCACAGTAGTGCAGCTGGGGATTGGGTGAATTGCGGCATTTGTGGCGAGTGGGCGCACTTTGGCTGCGACAGAAGGCAGGGTCTAGGCGCATTCAAGGATTATGCAAAAACAGATGGGCTAGAATATATATGTCCTCATTGTAGTGTTACAAATTTCAAGAAGAAACAAAGTGTTGCTAATGGCTATTCTCAAGGGTCAATGTCATCACGACCCCTTTAA 2349 0.4398 MFQFHTQGVQKQSSCTLLAVTCSSGFEQKKPQQNLLNYPFPDLVSAGRLEVQVLTNPEKEQFRKVLDSYQPNIVYLQGEQLDNGEVGPLVWQGMELSTPEDITELFGPTLPTAVYLEIPNGESYAEALHEKGIPYVIFWKNAFSCYAACHFRQAFLSVVQSSSTHTWDAFHLARASFELYCVQNNEVLPADNHEADSEMGPHLLGDTLTINVDPPEMAEEDDDEGSLGGLPAIKIHDDEVNLRFLICGAPSAVDESMLRSLEDGLSALLTIEIRGCKLHGKFSAPPPPLQAASFSRGVVTMRCDLSTCSSTHISLLVSGSAQTCFNDQLLENHIKNEIIENSQLVRAQLNNEGNINKQNVSEPRRSASIACGASVFEVCMKLPQWALQILRQLAPDVSYRSLVALGIASIQGLPVASFEKDDAERLLFFYQSSEKDSLTNNINFSSPPGWLKPPPPTRKRCDPSQEASPGLHDGVFAEQGAARKVDEKDKDRKMENGISTPLTPARQRLKVSAMRPIPHVRRHRMTPFCASEANGFDGGHVEANLPLVAPTKRSSIGSSSATQRKSFSGSAQSKQVISLNPLPLKKHGCGRGPVQTCSEEEFLKDVMEFLIIRGHTRLIPQGGLAEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMRNYTTTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVTNFKKKQSVANGYSQGSMSSRPL* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0078 782 SMART bright_3 597 701 IPR001606 GO:0003677
Aev02g0078 782 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 772 - -
Aev02g0078 782 MobiDBLite consensus disorder prediction 479 496 - -
Aev02g0078 782 SMART ARID_2 593 696 - -
Aev02g0078 782 Pfam ARID/BRIGHT DNA binding domain 599 696 IPR001606 GO:0003677
Aev02g0078 782 Gene3D - 594 699 IPR036431 GO:0003677
Aev02g0078 782 CDD PHD_ARID4_like 706 757 - -
Aev02g0078 782 ProSiteProfiles ARID domain profile. 596 700 IPR001606 GO:0003677
Aev02g0078 782 SUPERFAMILY FYVE/PHD zinc finger 692 760 IPR011011 -
Aev02g0078 782 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 700 763 IPR013083 -
Aev02g0078 782 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 772 IPR042293 -
Aev02g0078 782 SUPERFAMILY ARID-like 596 711 IPR036431 GO:0003677
Aev02g0078 782 MobiDBLite consensus disorder prediction 552 574 - -
Aev02g0078 782 MobiDBLite consensus disorder prediction 441 500 - -
Aev02g0078 782 CDD ARID 598 696 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0078 4 771 ARID Transcription Factor Family AT3G43240 61.183 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Aev02g0078 ARID 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0078 - - gmx:100816540 1370.91