Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0076 ATGAAGGGAAGTTCATCATCATCATCAGCATCTAAACTTAATTCTTCTGCTCAAGATGAATCTCTCTTAGTTGATGATTTCTACTTTTCAGCACTTTATGATTCTGAAGAAATATTTCCAATTTCTGATGAGAAATATGCTCAAGAACTTCACCTACAAGAGGCCCTATATTCCTCAATAACTATGTCCAAGTCCAATAATAGCAGAGTGAGTCACAATAAGAGGAAACACAGAGAGGTAAAAATAGTTGGTGAATCTTCTCATGACCAATTGCTGATTTGTGGTATTTGCATGGATGCAAAGCCAGATGAAGAAATGTTCAAGAACCAAAACTGCTCTCACAGTTTTTGTGATGATTGCATTGAGAAATATGTAGCAGCAAAGATTCAGGAGAATATATCAAATGTGAAATGCCCTGACCCAAAATGCAGGGGAACTCTGGATCCTCAGGATTGCATTTCAATCATACCAAAGGAGGTTTTTGATAGGTGGGAAAATGCACTTTGTGAGAATTTGGTGCTTGGATCTCAGAAATTCTATTGCCCTTTTAAGGATTGTTCTGCTATGTTGGTTGATGATGATGATGATGATGTTGTGATCACTTCCTCTGAGTGTCCTCATTGTAACAGATTGTTCTGTGCTCAGTGTAAGGTTCCATGGCATGATGGAATGGATTGTGAAGAGTTCATGAGTTTGAATGAAGGAGAGAGAGGGAAAGAAGATTTAATGTTGAAGCAACTTGCTAAGAGCAAGTTTTGGAGAAGATGTTCAAAATGCAAATTCTATGTGGAAAAGACTGATGGATGTGTGGTCATCAATTTTGCTATACCTGTGGATCCACTTGGAGTTCCAACCATGGATGTTAACTTGATTAGGAAAATTTTCAAGGACAATAGAGAATATTCATAA 909 0.374 MKGSSSSSSASKLNSSAQDESLLVDDFYFSALYDSEEIFPISDEKYAQELHLQEALYSSITMSKSNNSRVSHNKRKHREVKIVGESSHDQLLICGICMDAKPDEEMFKNQNCSHSFCDDCIEKYVAAKIQENISNVKCPDPKCRGTLDPQDCISIIPKEVFDRWENALCENLVLGSQKFYCPFKDCSAMLVDDDDDDVVITSSECPHCNRLFCAQCKVPWHDGMDCEEFMSLNEGERGKEDLMLKQLAKSKFWRRCSKCKFYVEKTDGCVVINFAIPVDPLGVPTMDVNLIRKIFKDNREYS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0076 302 Gene3D - 179 232 - -
Aev02g0076 302 ProSiteProfiles TRIAD supradomain profile. 90 302 IPR044066 -
Aev02g0076 302 SMART ibrneu5 162 226 IPR002867 -
Aev02g0076 302 ProSitePatterns Zinc finger RING-type signature. 112 121 IPR017907 -
Aev02g0076 302 SUPERFAMILY RING/U-box 170 230 - -
Aev02g0076 302 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 24 273 - -
Aev02g0076 302 ProSiteProfiles Zinc finger RING-type profile. 94 142 IPR001841 -
Aev02g0076 302 SUPERFAMILY RING/U-box 237 271 - -
Aev02g0076 302 SUPERFAMILY RING/U-box 89 171 - -
Aev02g0076 302 Pfam IBR domain, a half RING-finger domain 163 226 IPR002867 -
Aev02g0076 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 175 IPR013083 -
Aev02g0076 302 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 24 273 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0076 Aev-Chr2 437362 438865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0076 94 269 C3H Transcription Factor Family AT2G19610 25.683 2.80e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0076 K11975 - gmx:100816161 382.874