Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0074 ATGGTTTCTTCCCAACAAATAGCAAAAATAAGCACTTGGAATAACGATAATGGTTGTGGCAGCAACACACGAAGAAAGATTGAGATCAAAAGAGTTGAAGAAAGTAGCAAGCGCCATGTCACTTTCTCAAAGAGAAAACAAGGGCTTTTTAACAAAGTCACTGAACTCTCTATCCTTTGTCAAGCTGAAACCGCTTTGATCGTTAAATCCCAAAACGGCAAGCTCTACTCTTGCGGCTACCCGAATCCGGACATCGTCATTCGTCGATTCCTCAACAAGGCCTCTTCGCATGACGCACGTCCCGATAAGAATAACACTACTAGAAAATGTAAGCAAAAAGAGTATGTGGAAACCCTAAGGATCCAGTATGAGGCCACACAGGAGCTTCTGAAGCAGGAGAAGCAGCGTCGCGATGAGGCCAATGCGAAGAAGGCATCAATGGGGTTTCCTTGTTGGTGGGATTACTCCATTGATGAGATGGGTTTGGAGGAGCTTGAGCAATTCAAGGCCTCATTGGAACAATTGAAGATTAGCCTAATGGCAACAATGGAGGAGAAGAGGGTTAACTCAATTCAATTTCAACCAATGATGAAGATGCCCTTTCATTCAATGCTTCCAATGCAAAATAAGTATTCAAATTTTCCTCCAATCTTGAATAATGAGGGCTTAAGTAGTATTAAGCAAGAACAACAAGCATGGAATTTGAGGAATAATGGCATTATTGTTAGTAGTAGTAACAATAGTTCTTTGGGAACATGGGAGTTGGGTAATAATAATGCTATTGCTAATAGTAGTCATCATAGTTATATCCATCCAAATGTTGATTTTGGTCATTATTATCACAATTAG 849 0.4028 MVSSQQIAKISTWNNDNGCGSNTRRKIEIKRVEESSKRHVTFSKRKQGLFNKVTELSILCQAETALIVKSQNGKLYSCGYPNPDIVIRRFLNKASSHDARPDKNNTTRKCKQKEYVETLRIQYEATQELLKQEKQRRDEANAKKASMGFPCWWDYSIDEMGLEELEQFKASLEQLKISLMATMEEKRVNSIQFQPMMKMPFHSMLPMQNKYSNFPPILNNEGLSSIKQEQQAWNLRNNGIIVSSSNNSSLGTWELGNNNAIANSSHHSYIHPNVDFGHYYHN* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0074 282 Gene3D - 34 117 IPR036879 GO:0003677|GO:0046983
Aev02g0074 282 PRINTS MADS domain signature 24 44 IPR002100 GO:0003677|GO:0046983
Aev02g0074 282 PRINTS MADS domain signature 44 59 IPR002100 GO:0003677|GO:0046983
Aev02g0074 282 PRINTS MADS domain signature 59 80 IPR002100 GO:0003677|GO:0046983
Aev02g0074 282 PANTHER MADS BOX PROTEIN 17 196 - -
Aev02g0074 282 ProSiteProfiles MADS-box domain profile. 22 82 IPR002100 GO:0003677|GO:0046983
Aev02g0074 282 SMART madsneu2 22 81 IPR002100 GO:0003677|GO:0046983
Aev02g0074 282 Coils Coil 116 143 - -
Aev02g0074 282 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 17 196 - -
Aev02g0074 282 Coils Coil 165 185 - -
Aev02g0074 282 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 31 77 IPR002100 GO:0003677|GO:0046983
Aev02g0074 282 SUPERFAMILY SRF-like 23 93 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0074 Aev-Chr2 432921 434068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0074 21 187 Type I MADS-box Gene Family AT5G60440 35.882 2.55e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev02g0074 SRF-TF 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0074 - - aip:107627188 232.261