Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0058 ATGGGGGAGAAAGATGATGACATGGGTTTGGGTTTGGGGTTGAGTTTGAGCTTGGGTTGTGGTGAGAATGCAAATAATCAACAGCAACAACAACCCTTCAAGTTGAATGTGGTGAATCTCATGCAAAAGCCTCCTCAATCGCTCCCAAATCAAAGGCTTTCCCTAAACAACTTGTTCCATTTTCATGATCTGAGCTCCGAGACGAGGTCATTCCTCCGCGGAATCGACATGAACTCCGCGCCGCCGTATCCATCGGTGGCGGCTGCCGTGGCATGCGACGACGAGAACGGCGGAGCGTCGTCACCGAACAGCACGGTGTCGAGCCTCAGCGGGAAGCGGAGTGAGAGAGAGCCAAACGGAGACGAGAACGACGCCGGCGAGAGGACGTCGTGCTCTCGCGGCGGAGCAAGCGACGAAGATGACGGCGGCGGTTTCGGCGTCGACGGTGACGGCGGAGACAGCTCGAGGAAGAAGCTGAGGCTGTCGAAGGAACAGTCGGTGGTGCTTGAAGAGACCTTCAAGGAGCACAACACACTGAACCCGAGACAAAAGCAAGCATTGGCACAGCAATTGAATCTGAGGCCCAGGCAGGTGGAGGTGTGGTTTCAGAACAGAAGAGCAAGGACCAAGTTAAAGCAGACTGAAGTGGACTGTGAATACTTGAAGAGATGCTGCGAAAATCTAACCGAAGAGAATAGGAGGCTGCAAAAGGAAGTGCAAGAGCTTAGAGCATTGAAGCTATCCCCACAGCTCTACATGCATATGAACCCTCCCACTACTCTTACAATGTGCCCTTCATGCGAGCGCGTTGCTGTCTCATCCACATCCTCGTCCTCCTCGGCCACCATGCCCCCTGCCCCAGCTCAAGTTAATCGCAACCTGATGGGCCCTAACATCCAGCGGCCTATTCCTATCAACCCTTGGGCTGCGATGCCAATCCAACACCGGCCATTCGAGGGGCCCACTCCCCGGCCATAA 978 0.5481 MGEKDDDMGLGLGLSLSLGCGENANNQQQQQPFKLNVVNLMQKPPQSLPNQRLSLNNLFHFHDLSSETRSFLRGIDMNSAPPYPSVAAAVACDDENGGASSPNSTVSSLSGKRSEREPNGDENDAGERTSCSRGGASDEDDGGGFGVDGDGGDSSRKKLRLSKEQSVVLEETFKEHNTLNPRQKQALAQQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPSCERVAVSSTSSSSSATMPPAPAQVNRNLMGPNIQRPIPINPWAAMPIQHRPFEGPTPRP* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0058 325 Coils Coil 218 248 - -
Aev02g0058 325 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 9 314 - -
Aev02g0058 325 SUPERFAMILY Homeodomain-like 144 213 IPR009057 -
Aev02g0058 325 SMART halz 212 255 IPR003106 GO:0006355|GO:0043565
Aev02g0058 325 MobiDBLite consensus disorder prediction 94 161 - -
Aev02g0058 325 SMART HOX_1 154 216 IPR001356 GO:0003677
Aev02g0058 325 ProSitePatterns 'Homeobox' domain signature. 187 210 IPR017970 GO:0000981|GO:0006355
Aev02g0058 325 ProSiteProfiles 'Homeobox' domain profile. 152 212 IPR001356 GO:0003677
Aev02g0058 325 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Aev02g0058 325 PANTHER - 9 314 - -
Aev02g0058 325 Pfam Homeobox associated leucine zipper 212 246 IPR003106 GO:0006355|GO:0043565
Aev02g0058 325 CDD homeodomain 156 213 IPR001356 GO:0003677
Aev02g0058 325 Pfam Homeodomain 156 210 IPR001356 GO:0003677
Aev02g0058 325 Gene3D - 160 210 - -
Aev02g0058 325 Pfam HD-ZIP protein N terminus 1 117 IPR006712 GO:0005634
Aev02g0058 325 MobiDBLite consensus disorder prediction 114 128 - -
Aev02g0058 325 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0058 Aev-Chr2 348280 351300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0058 45 320 Homeobox Transcription Factor Family AT3G60390 61.324 7.14e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev02g0058 HD-ZIP_N 9.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0058 K09338 - gmx:100810641 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0058 02 348280 351300 Aev02g0058 02 348280 351300 ECH
Aev02g0058 02 348280 351300 Aev06g3814 06 38099871 38101911 PCT