Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0057 ATGTTGTTCCTCCAGCGGCGCCATTTCTGCACCACAGTGCTCTCAAAAATCCCTTCAAAGTACAAGAACCTTGCTGTGTATCAAGCCCAACAAGTCTTCACCGATTACCTTCACGCCACAAGGTGCATCCCTTATGCCTACGCTGACCGGATTGCCTCTAACTCACGCTCATCTCTCTCCAACCTCGTTTCCAAGGTTGGATTCTCTGCTGAGACAGCTCCGAGCTTCTCCAAGAGCCTCAACAAGTTCCTCAGGTACAACCCCATTAATGAATTTGAGTTCTTCTTTGAGAGCATTGGCATAAAGTATACTGAAGTTGCTGACTTGTTGCCTCCCAACAAGTTTTTCTTCTCTGAAGATGGGTCTCTTTTGGATGCTGCTTCTGTGCTGTATGAATTTGGGTTCCCCTGGGATAAGCTTGGCTTGCTTTATGTGAAGGGTGGTTCTGTGTTTAGATCTAGTCCCGAGGAGTTGAAGGATAGGCTTTGTAGGCTCAAAAGGCATGGCTTTTGCAGTGAACAGGTCGTTGGGATATGCTTGGCCTTCCCTTTTGTTTTTCACGAGGAAGGAGTGTCAGGTGTTGAGATCGATGAGTTGCTTGCTGATCTCAAGTCCCTTTTTCTGGATTTTGATTTGGCAGGGTCTGTGGATTCTTGGTATGAGGTGTGCAGGAGAATTCGGGTGTTCTATGATCTGATTGGTGAGAAGGGTAAGATGGCGGAGCTTATTGGAAAGAACAAGAATGCCATTCTTAAGAATGGAGAAGAAAATCTGACGCAGAAAGCCAATTATTTTTGTAGGTTTGGTGTCAAGAAAGAGGAAGTAGCTCGGCTGATGCTACAGGGCTCTGAGTTGCTGAGTCTCAATTTGGAAACGCGAGTGATTAACGTATTGAAGCTGTTGAAACACTTAGGCATGAGCTCCAAAGATCTCGCGGATGTTAGGCAGAATTATGCTCATGTGTTGGGAACAATAAAAATGGCAAATCTGCCTAGTGTAATGAGGGCTTTGGATTTACATGAATGGTTCATTGATAAGATCAAGGATGAGAATCATCAATTGTTGGTGAATTATGTCACAAGCTACCCCAATGAAGACCGAGATAAAGATTATCAAGGTGGTTTAAAGGCAATTCGTGATTCAAGAACCCCAGTTCACAACATGAATAAATTAAATTTCTTGCATGCCATAGGCTTTGGAGAAAATGCTTTGACCATGTACGTCTTAAATGACCTGCATGGATGTAGTAGTGAGTTACACGTAAGATATGATTTCCTTCTTGCTTCAGGGATTGAATTCTCAAAACTCTGTAAGATGATCAGAATTCGACCTCGGATTCTAAGCCAAAACCCTGAAATTATAAAAGAAAAGATTAATTACATCTGTCAGGAAATGGGCACCTTAGAGCTTTTGTTCCGATTTCCAGCATTCTTATGTTTTGACTTGGAAAAACGCATTAGGCCCAGGATCAGATTCCATAAGTGGATTAAAGAAATGGGTCTGTGCACCAAAAACTATTCTGTTGCAAGCATGATTGCGACCAGTGACAAGAATTTTGTTCCTCGTGTTTTTAAAATGCACCCGGCCGCTCCAAAACATTGGTTTGAGCAATTCTATCTCCGCAGATTTCCGGTAGGATGA 1641 0.429 MLFLQRRHFCTTVLSKIPSKYKNLAVYQAQQVFTDYLHATRCIPYAYADRIASNSRSSLSNLVSKVGFSAETAPSFSKSLNKFLRYNPINEFEFFFESIGIKYTEVADLLPPNKFFFSEDGSLLDAASVLYEFGFPWDKLGLLYVKGGSVFRSSPEELKDRLCRLKRHGFCSEQVVGICLAFPFVFHEEGVSGVEIDELLADLKSLFLDFDLAGSVDSWYEVCRRIRVFYDLIGEKGKMAELIGKNKNAILKNGEENLTQKANYFCRFGVKKEEVARLMLQGSELLSLNLETRVINVLKLLKHLGMSSKDLADVRQNYAHVLGTIKMANLPSVMRALDLHEWFIDKIKDENHQLLVNYVTSYPNEDRDKDYQGGLKAIRDSRTPVHNMNKLNFLHAIGFGENALTMYVLNDLHGCSSELHVRYDFLLASGIEFSKLCKMIRIRPRILSQNPEIIKEKINYICQEMGTLELLFRFPAFLCFDLEKRIRPRIRFHKWIKEMGLCTKNYSVASMIATSDKNFVPRVFKMHPAAPKHWFEQFYLRRFPVG* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0057 546 Pfam mTERF 231 323 IPR003690 GO:0003690|GO:0006355
Aev02g0057 546 Pfam mTERF 418 519 IPR003690 GO:0003690|GO:0006355
Aev02g0057 546 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Aev02g0057 546 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Aev02g0057 546 SMART mt_12 437 467 IPR003690 GO:0003690|GO:0006355
Aev02g0057 546 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Aev02g0057 546 SMART mt_12 468 502 IPR003690 GO:0003690|GO:0006355
Aev02g0057 546 PANTHER CGI-12 PROTEIN-RELATED 12 539 IPR003690 GO:0003690|GO:0006355
Aev02g0057 546 Gene3D Transcription termination factor 3, mitochondrial 53 215 IPR038538 -
Aev02g0057 546 Gene3D Transcription termination factor 3, mitochondrial 216 539 IPR038538 -
Aev02g0057 546 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 12 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0057 Aev-Chr2 340722 342561 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev02g0057 mTERF 6.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0057 - - gsj:114418754 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0057 02 340722 342561 Aev02g0057 02 340722 342561 ECH