Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0049 ATGCATGGGAGGAAAGAGCAAGATGAGGAGTGTATAAGGAAAGGGCCATGGAAAGCAGAGGAAGATAAGGTGCTAATTGAGCATGTCAACAAGTATGGCCCCAGAGATTGGAGCTCCATTCGATCCAATGGTCTTCTCCACAGGACTGGCAAGTCTTGTCGTCTTCGTTGGGTCAATAAGCTTCGACCAAACCTCAAGAATGGGGTCAAGTTTACAGCAGAGGAAGAGAGGGTTGTGATAGAGTTGCAGGCACAATTTGGGAACAAATGGGCAAAGATTGCATCTTACTTGGCAGGGAGAACTGACAATGATGTCAAGAATTTCTGGAGCAGTAGGCAGAAGAGGCTCGCCAGGATTCTGCAGCAGACTTCAACAACCTCCTCCAAATCATCACACAAGAACAAAACTAAAGTTCCTCCTCCTACAGTTCATGATGTCCATACTTCAGAGGCTCCTAAGCTTAGTTCTTCATCAGAGGGAGAACCATCATCAAAGCCACAACAACTATGCTCATTAACCTGCATTGACAATAATTCTGAGGTTATCAAAATGGTGTCACTGCCAGATCTTATAAAGTCCAAGCCACCTAGTTCTGAGCAAGAGTTTCTCATTACCCCTAATTTTGAGAGCTACAAAAGCACTAGTACTGATGAACAGATTGCATTCCCTCAGGATCCAGAGTTCCAACTTACAGATATAACATTCCCAAATTTCATACATGACTTTGGCCCTATGGATACTTATGATGATGAGTTTGGAATAGGTCTGCAACAACACCCCATTGAGTTCCCTAATTTCTCTGATGAGCCATCATCATCAGGAAGCTGCAGAGTTGGTACGGGGGATATAAGAATTGGAAGCTCCAAAAACTGTGAGAGCTTCTTCGATGATTTCCCAGAAGACATGTTTAATCTCATGGAGCCACCTTCAAGCCCACCGAAGCTATGA 948 0.4409 MHGRKEQDEECIRKGPWKAEEDKVLIEHVNKYGPRDWSSIRSNGLLHRTGKSCRLRWVNKLRPNLKNGVKFTAEEERVVIELQAQFGNKWAKIASYLAGRTDNDVKNFWSSRQKRLARILQQTSTTSSKSSHKNKTKVPPPTVHDVHTSEAPKLSSSSEGEPSSKPQQLCSLTCIDNNSEVIKMVSLPDLIKSKPPSSEQEFLITPNFESYKSTSTDEQIAFPQDPEFQLTDITFPNFIHDFGPMDTYDDEFGIGLQQHPIEFPNFSDEPSSSGSCRVGTGDIRIGSSKNCESFFDDFPEDMFNLMEPPSSPPKL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0049 315 Gene3D - 69 139 - -
Aev02g0049 315 Gene3D - 14 66 - -
Aev02g0049 315 SMART sant 13 63 IPR001005 -
Aev02g0049 315 SMART sant 67 115 IPR001005 -
Aev02g0049 315 ProSiteProfiles Myb-like domain profile. 70 113 IPR001005 -
Aev02g0049 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 65 IPR017930 -
Aev02g0049 315 CDD SANT 16 61 IPR001005 -
Aev02g0049 315 CDD SANT 70 109 IPR001005 -
Aev02g0049 315 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev02g0049 315 Pfam Myb-like DNA-binding domain 70 109 IPR001005 -
Aev02g0049 315 Pfam Myb-like DNA-binding domain 14 59 IPR001005 -
Aev02g0049 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 117 IPR017930 -
Aev02g0049 315 MobiDBLite consensus disorder prediction 149 169 - -
Aev02g0049 315 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Aev02g0049 315 MobiDBLite consensus disorder prediction 120 137 - -
Aev02g0049 315 MobiDBLite consensus disorder prediction 120 169 - -
Aev02g0049 315 PANTHER TRANSCRIPTION FACTOR DUO1 1 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0049 Aev-Chr2 301857 303413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0049 4 312 MYB Transcription Factor Family AT3G60460 42.947 3.09e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev02g0049 Myb_DNA-binding 7.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0049 K09422 - gmx:100818656 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0049 02 301857 303413 Aev02g0049 02 301857 303413 ECH