Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0036 ATGTTGGAATACGAATGGGGGAACCCGTCAACCATAATGCTCACCGGAAACGAAGACGGCGGCGGCGCACAGCCCTCCTCCGACCAAGCCCATCGCCAACTGTTCGAGCACTACGCCTCACACGCGTTGCTCCCCGAGCACTTCCTGCATGGGCCCGGCCCCACCGCAACCACCACCGCAAACGCACACACAGCCACAAACACCAACAACACCATCGACCTCTCTCATCACCACAACTTCGCCCCACAAGCCCACCACAACCACCACGTCCACCACACCTTCTTCGACCCACGCGCCTTCCACGGAGCGTCCCCAACCCCCTACCCTCCGCCCCAGCCCCCTCCTCCCCACCACTCCATGCTCTCCCTAGACCCCTTGCCCCATCACGCCCACTGCGGGCCCGGCCTCCTCCTCGTGCCGAAATCGGAGGATGTCGGCCGGCCCATGGACTTCGTGGGCTCCCGAATCGGGCTGAACCTGGGAGGCCGCACCTACTTCTCATCCTCAGAGGACGACTTCGTGAGCAGGCTTTACCGCAGGTCAAGGCCCGCGGAGCCGGGGTCGACGGTGGCGTCGTCGAACAACTCGCCGCGGTGCCAGGCGGAGGGGTGCAATGCTGATCTGTCGCAGGCGAAGCACTACCACCGGCGCCACAAGGTGTGCGAGTTCCACTCCAAGGCCTCCACCGTCATCGCGGCCGGGTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTCCATCTTCTTTCTGAGTTCGACAATGGAAAACGTAGCTGCAGGAAGAGGCTGGCAGATCATAATCGTCGCAGAAGAAAAACCCAGCAACCACCAACTCAAGACATCCACAAATCTCAGCCTACTAATTTGGATAACGTTGCAAGGTCCCCGCCGGACTCCGGAGCACAGTCTTCGTCATCGGTGACGGTGGCGGTGTCGCCACCGGACTATTTCCGGCAGAGGCCGTACCAAAGCACAAGCCCATCAACAACTTCAAGCTCACTGTTTTTCTCAAGCGGGTAG 1020 0.6098 MLEYEWGNPSTIMLTGNEDGGGAQPSSDQAHRQLFEHYASHALLPEHFLHGPGPTATTTANAHTATNTNNTIDLSHHHNFAPQAHHNHHVHHTFFDPRAFHGASPTPYPPPQPPPPHHSMLSLDPLPHHAHCGPGLLLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEPGSTVASSNNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPPTQDIHKSQPTNLDNVARSPPDSGAQSSSSVTVAVSPPDYFRQRPYQSTSPSTTSSSLFFSSG* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0036 339 MobiDBLite consensus disorder prediction 179 199 - -
Aev02g0036 339 Gene3D - 190 260 IPR036893 GO:0003677|GO:0005634
Aev02g0036 339 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 99 323 - -
Aev02g0036 339 Pfam SBP domain 199 272 IPR004333 GO:0003677
Aev02g0036 339 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 99 323 IPR044817 GO:0003677
Aev02g0036 339 MobiDBLite consensus disorder prediction 103 121 - -
Aev02g0036 339 MobiDBLite consensus disorder prediction 278 339 - -
Aev02g0036 339 SUPERFAMILY SBT domain 197 275 IPR036893 GO:0003677|GO:0005634
Aev02g0036 339 MobiDBLite consensus disorder prediction 98 123 - -
Aev02g0036 339 ProSiteProfiles Zinc finger SBP-type profile. 196 273 IPR004333 GO:0003677
Aev02g0036 339 MobiDBLite consensus disorder prediction 261 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0036 Aev-Chr2 223446 225564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0036 1 246 SBP-box Gene Family AT1G02065 45.098 1.05e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev02g0036 SBP 4.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0036 - - gmx:100802206 459.529