Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0035 ATGGAGTTTGGAGAGAAGATGTTGTGTATTAGCAACCATATGCAGATGCAGATGCAGATGGTGAGCGAGCAAAGTGATGTAAACAGTGGAAGAAGTAGTAACAGTAATAACAATAACAATAACAATAACAACAACCCCACTTTTGCTTGGTACTCTTCATCATCATGGCAACCGTCTGTTAGTAATAATAACCATAGCAATAATTCCAGCCTGGGCCTCTTTAACAACGCATTCCACACTGCGGCTGAGGCCACCTCCCCTCACCGCCAGGCGCACCCGGACCCACACCTCACGTGCCTCAAGCTCGGCAAGAGGCATTACTTTGAGGACAGCAGCAGCAGCAGCAACGTGGATGGTGGTGTTGCTCCTCCTCTGCGAGGGGAGAAGAGCGGTGGGACGGGGGTGGCAAGGTGCCAGGTGGAGGGATGCGAGGTGGCACTGGCGAAGTCGAAGGAGTACCACCGGAGGCACAAAGTGTGTGAGATGCATTCTAAGGCTCCCATCGTTGTCGTCTTAGGCAGGGACCAACGCTTCTGTCAGCAGTGCAGCCGGTTTCATGTGGTGTCAGAGTTTGATGAGTCAAAGAGGAGCTGTAGGAGGAGACTTGCTGGCCATAATGAGAGAAGAAGAAAGAACGCTCATCACTCTCAGCACCAGCACCAGCACCAGCACCAGCATTCTACTTCTCTTTCTGTTGCTACCAATAATTCCACACAAGGAGGGTGTGCTCTCTCTCTTCTGTCAGCAGGAGGAGCAGGTGGGAGTGAATCGTGGCTTTCTCACCATTCTGATCTCTCCATAAGATGCAGTGCTGCTTTGCACGAATTGATAGCCGAAAACCGTGCTGCCCTCCTCATCACTTCTAGGCACCACCTTCATCTGCACGACACAGACCACCTAAATCATCCTCAATGGGATCAGAGGCACTACTAA 933 0.5123 MEFGEKMLCISNHMQMQMQMVSEQSDVNSGRSSNSNNNNNNNNNNPTFAWYSSSSWQPSVSNNNHSNNSSLGLFNNAFHTAAEATSPHRQAHPDPHLTCLKLGKRHYFEDSSSSSNVDGGVAPPLRGEKSGGTGVARCQVEGCEVALAKSKEYHRRHKVCEMHSKAPIVVVLGRDQRFCQQCSRFHVVSEFDESKRSCRRRLAGHNERRRKNAHHSQHQHQHQHQHSTSLSVATNNSTQGGCALSLLSAGGAGGSESWLSHHSDLSIRCSAALHELIAENRAALLITSRHHLHLHDTDHLNHPQWDQRHY* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0035 310 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 31 303 - -
Aev02g0035 310 ProSiteProfiles Zinc finger SBP-type profile. 135 212 IPR004333 GO:0003677
Aev02g0035 310 SUPERFAMILY SBT domain 136 215 IPR036893 GO:0003677|GO:0005634
Aev02g0035 310 MobiDBLite consensus disorder prediction 205 222 - -
Aev02g0035 310 Pfam SBP domain 138 211 IPR004333 GO:0003677
Aev02g0035 310 MobiDBLite consensus disorder prediction 20 49 - -
Aev02g0035 310 Gene3D - 129 199 IPR036893 GO:0003677|GO:0005634
Aev02g0035 310 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 31 303 IPR044817 GO:0003677
Aev02g0035 310 MobiDBLite consensus disorder prediction 205 235 - -
Aev02g0035 310 MobiDBLite consensus disorder prediction 110 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0035 Aev-Chr2 211711 213875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0035 99 211 SBP-box Gene Family AT1G27370 55.645 1.87e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev02g0035 SBP 8.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0035 - - gmx:100786328 216.083