Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0031 ATGCAGAGCGACGAAGCAGCGGAGCTGGAGTGGGTGTCGCAATTCGTGGACGACACGACGTCGTTTATCCCGGATGACATTATTATTATTCCTGACAGCAAGAGCAAGAGCAAGAAGAAGGAGATGACGAAGGAATCATCGCATGCTGCTTCGACGTCGAAGAGATCCAAGGGAGGAGCATCAGCAGGAATGGGGGTGCGGAGGTGCAGCCACTGCGCCTCGGAGAAGACGCCGCAGTGGCGGAGTGGGCCCCTGGGCCCAAAGACTCTCTGCAACGCCTGCGGTGTGAGGTTTAAGTCGGGCAGGCTGGTCCCCGAGTACAGGCCCGCTGCCAGCCCCACCTTCGTCCTCACTCAGCACTCTAACTCTCACCGCAAAGTCATGGAGCTCCGCCGCCAGAAGCACCTAGCTGCTCCGCCAACCATCAACACTCTTTAA 438 0.5845 MQSDEAAELEWVSQFVDDTTSFIPDDIIIIPDSKSKSKKKEMTKESSHAASTSKRSKGGASAGMGVRRCSHCASEKTPQWRSGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLTQHSNSHRKVMELRRQKHLAAPPTINTL* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0031 145 MobiDBLite consensus disorder prediction 33 51 - -
Aev02g0031 145 ProSitePatterns GATA-type zinc finger domain. 69 94 IPR000679 GO:0006355|GO:0043565
Aev02g0031 145 PANTHER GATA TRANSCRIPTION FACTOR 2 2 137 - -
Aev02g0031 145 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 67 127 - -
Aev02g0031 145 Gene3D - 63 135 IPR013088 GO:0006355|GO:0008270
Aev02g0031 145 MobiDBLite consensus disorder prediction 33 65 - -
Aev02g0031 145 SMART GATA_3 63 113 IPR000679 GO:0006355|GO:0043565
Aev02g0031 145 CDD ZnF_GATA 68 115 IPR000679 GO:0006355|GO:0043565
Aev02g0031 145 Pfam GATA zinc finger 69 102 IPR000679 GO:0006355|GO:0043565
Aev02g0031 145 PANTHER GATA TRANSCRIPTION FACTOR 2 137 - -
Aev02g0031 145 ProSiteProfiles GATA-type zinc finger domain profile. 67 99 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0031 Aev-Chr2 177955 178392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0031 3 134 C2C2-Gata Transcription Factor Family AT3G60530 55.484 2.54e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev02g0031 GATA 1.1e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0031 - - gmx:100803262 166.777