Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0010 ATGACAACCAATGATTATTGCCTGACTGATGTAGTCCAAGTAACTGCTGCTGACTTTGATGGTCGAGAGTTTCAAACTGAAGATGAAGCGTATGACTTATATGTGAAATATGCTAGAGTAGTTGGATTTGGGGTAAGGAAAAGTGATCTTGCTCGTGACAGAAATGGTCGACCATGTAGGCGCAAGTTTGTGTGTAGTCGTGCGGGTGTTAGAGATGAAAAACATTACAATAGAGATGATAGGAAGCGTGAGCACAAGGCAGAGACAAGAAGTAATTGCAGTGCTAGTATTTCGCGCATCTCATACCAAACCATCGTCGAATCCACAATGGGAGAGAAGGCACAAATAGAGACAATGCATAGATATGGGATGCAGACGTCACAGATAATGGGCTTCATGGCTGGCCAATCGGGGGGTTATCGAAGATTAGGATTTTCCAAGAAGGACTTATATAACTACATTGATCGTGATAGAAGAGGTAAAATAGCTGATGGCGATGCCGAAGCTGCAATTAGCTACTTGGAGGGCAGGGCTGATAGTGATGGACTTACTCTTGCTAGGTGGGTTGCTAGTGCATATGAGAAGAAAGAAATGTGGGCTACTGCGTATTTGAGAGGCAAATTCTCAGCTGGAATTAGGACAACATCTCGATGGGCTGCAAGGGTTTACACTTGCGCCATATTCAAGGAGGTCAGGAAGGAGATTGAGCATGTTTCTTCATTGGTTCTTGTTAATCGGACGAGAATGTCTACTAGTGTTGCGTACAAGTTGTGCAAATTTGGCAAACTTGGTCGCATATTTGAAGTCCTTTACGATAGGAACGGGGACAAGGATGGGGCAAAGGTAGAATGCAAATGTTGTTACTGGGACATGAATGGCATTCCTTGCAGGCATATGTTTTTTGTTATGAAGGAGGAACACATTTGTGAGATGCCGAAAAGCATGATAAAGAGGCGTTGGTGCAAGGATGCAAAGGTGTTTGAGGATAACGGGGACGTTGATGATACTGGAAGATCGCAAATATTGCGGCGCGCAGCACTGACTTCAGCAAGCGGGTGGATGACATTCCTTGGTAGTGAGAGTAGGATGGCTTTTCGAACAACGATGGATGGAATAGAGTCCATAACCTCGAAGCTTGAAAGTGGGATGTATTTTGACAAGGGTACTGCAACATCCTCGGAGACAATGAAAATTGGTGACCCAAATGTGTCGAAGACAAAGGGTGCCCCAAGGAAAGGGAAGGCGGGTTTAAAGAAACGTTGTTGCTCCAATTGCGGTCAAGGTGGTCACACAAAGAGAACTTGTCGAAATAGTAAAGAGCCGGACGAGCCTAATACTGATGATGAATATGATGCCATGGATAGTCAATGGAAAAATGCGAGGCTGGCATGA 1392 0.4461 MTTNDYCLTDVVQVTAADFDGREFQTEDEAYDLYVKYARVVGFGVRKSDLARDRNGRPCRRKFVCSRAGVRDEKHYNRDDRKREHKAETRSNCSASISRISYQTIVESTMGEKAQIETMHRYGMQTSQIMGFMAGQSGGYRRLGFSKKDLYNYIDRDRRGKIADGDAEAAISYLEGRADSDGLTLARWVASAYEKKEMWATAYLRGKFSAGIRTTSRWAARVYTCAIFKEVRKEIEHVSSLVLVNRTRMSTSVAYKLCKFGKLGRIFEVLYDRNGDKDGAKVECKCCYWDMNGIPCRHMFFVMKEEHICEMPKSMIKRRWCKDAKVFEDNGDVDDTGRSQILRRAALTSASGWMTFLGSESRMAFRTTMDGIESITSKLESGMYFDKGTATSSETMKIGDPNVSKTKGAPRKGKAGLKKRCCSNCGQGGHTKRTCRNSKEPDEPNTDDEYDAMDSQWKNARLA* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0010 463 SUPERFAMILY Retrovirus zinc finger-like domains 407 440 IPR036875 GO:0003676|GO:0008270
Aev02g0010 463 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 220 392 - -
Aev02g0010 463 MobiDBLite consensus disorder prediction 394 463 - -
Aev02g0010 463 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 97 IPR031052 GO:0006355
Aev02g0010 463 ProSiteProfiles Zinc finger CCHC-type profile. 422 437 IPR001878 GO:0003676|GO:0008270
Aev02g0010 463 Pfam FAR1 DNA-binding domain 33 98 IPR004330 -
Aev02g0010 463 ProSiteProfiles Zinc finger SWIM-type profile. 267 307 IPR007527 GO:0008270
Aev02g0010 463 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 17 97 - -
Aev02g0010 463 Pfam SWIM zinc finger 281 299 IPR007527 GO:0008270
Aev02g0010 463 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 220 392 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0010 Aev-Chr2 56503 58642 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev02g0010 FAR1 2.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0010 - - ahf:112776551 205.682