Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0007 ATGGAGAGCAAGAGTTTTGAAGATTCTGATGACAGAAGCAGTGAAAACACCAGCATGTGTAGGTCGGAAAACAGCAACCAGGAATCTGACACGTCTTTTTCTGATTGGTCTGATGAAGAAGAAGTAGAAAACAACAGTTTGGATAATAGGCAGAAAACATATGTGAGGCAAGGTGAAAAGTTGAAAGAGAAAATGACAACCAATGATTATTGCCTGACTGATGTAGTCCAAGTAACTGCTGCTGACTTTGATGGTCGAGAGTTTCAAACTGAAGATGAAGCGTATGACTTATATGTGAAATATGCTAGAGTAGTTGGATTTGGGGTAAGGAAAAGTGATCTTGCTCGTGACAGAAATGGTCGACCATGTAGGCGCAAGTTTGTGTGTAGTCGTGCGGGTGTTAGAGATGAAAAACATTACAATAGAGATGATAGGAAGCGTGAGCACAAGGCAGAGACAAGAAGTAATTGCAGTGCTAGCCTTGAAAGAGTTTTGAAGGAGTATAGGAACAATGAGTTGGAGGCCCAATTCCGTTCTATTTATACATGGCCTGTTCTAACAACGGGGTTGCGGTCAATTGAGGAAGGGGCTGCAAGGGTTTACACTTGCGCCATATTCAAGGAGGTCAGGAAGGAGATTGAGCATGTTTCTTCATTGGTTCTTGTTAATCGGACGAGAATGTCTACTAGTGTTGCGTACAAGTTGTGCAAATTTGGCAAACTTGGTCGCATATTTGAAGTCCTTTACGATAGGAACGGGGACAAGGATGGGGCAAAGGTAGAATGCAAATGTTGTTACTGGGACATGAATGGCATTCCTTGCAGGCATATGTTTTTTGTTATGAAGGAGGAACACATTTGTGAGATGCCGAAAAGCATGATAAAGAGGCGTTGGTGCAAGGATGCAAAGGTGTTTGAGGATAACGGGGACGTTGATGATACTGGAAGATCGCAAATATTGCGGCGCGCAGCACTGACTTCAGCAAGCGGGTGGATGACATTCCTTGGTAGTGAGAGTAGGATGGCTTTTCGAACAACGATGGATGGAATAGAGTCCATAACCTCGAAGCTTGAAAGTGGGATGTATTTTGACAAGGGTACTGCAACATCCTCGGAGACAATGAAAATTGGTGACCCAAATGTGTCGAAGACAAAGGGTGCCCCAAGGAAAGGGAAGGCGGGTTTAAAGAAACGTTGTTGCTCCAATTGCGGTCAAGGTGGTCACACAAAGAGAACTTGTCGAAATAGTAAAGAGCCGGACGAGCCTAATACTGATGATGAATATGATGCCATGGATAGTCAAATGGAAAAATGCGAGGCTGGCATGAATGTAACAAGCACGCAGCAGTCAACAGCTGGGATGCAGAAAGATGGGGATGGTGTTGTAAGTGAAGGGGTTGGCAATTGGAGTGCTGAAAGGCAGTTTAATCATGTTGGTAGTAGCCATATCTTCATTGGTGGGCATCATATTAACCAATTTTTCCCTTACAATGCTCAGTTCCAAAGTGAGATAAGTCCGTTTAATGGAAACCCATCCGCGGGTGGGAATAGAAGTGTTTCTGGTGACCCTGGACACCAATGGTTGCTACAGAACTTTATTGGCAGTCAACAGGGTGCAGATAGATCAACGTCCTGA 1635 0.441 MESKSFEDSDDRSSENTSMCRSENSNQESDTSFSDWSDEEEVENNSLDNRQKTYVRQGEKLKEKMTTNDYCLTDVVQVTAADFDGREFQTEDEAYDLYVKYARVVGFGVRKSDLARDRNGRPCRRKFVCSRAGVRDEKHYNRDDRKREHKAETRSNCSASLERVLKEYRNNELEAQFRSIYTWPVLTTGLRSIEEGAARVYTCAIFKEVRKEIEHVSSLVLVNRTRMSTSVAYKLCKFGKLGRIFEVLYDRNGDKDGAKVECKCCYWDMNGIPCRHMFFVMKEEHICEMPKSMIKRRWCKDAKVFEDNGDVDDTGRSQILRRAALTSASGWMTFLGSESRMAFRTTMDGIESITSKLESGMYFDKGTATSSETMKIGDPNVSKTKGAPRKGKAGLKKRCCSNCGQGGHTKRTCRNSKEPDEPNTDDEYDAMDSQMEKCEAGMNVTSTQQSTAGMQKDGDGVVSEGVGNWSAERQFNHVGSSHIFIGGHHINQFFPYNAQFQSEISPFNGNPSAGGNRSVSGDPGHQWLLQNFIGSQQGADRSTS* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0007 544 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 162 406 IPR031052 GO:0006355
Aev02g0007 544 MobiDBLite consensus disorder prediction 405 426 - -
Aev02g0007 544 SUPERFAMILY Retrovirus zinc finger-like domains 385 418 IPR036875 GO:0003676|GO:0008270
Aev02g0007 544 Pfam SWIM zinc finger 259 277 IPR007527 GO:0008270
Aev02g0007 544 MobiDBLite consensus disorder prediction 1 51 - -
Aev02g0007 544 Pfam FAR1 DNA-binding domain 97 163 IPR004330 -
Aev02g0007 544 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 55 161 - -
Aev02g0007 544 ProSiteProfiles Zinc finger SWIM-type profile. 245 285 IPR007527 GO:0008270
Aev02g0007 544 MobiDBLite consensus disorder prediction 506 526 - -
Aev02g0007 544 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 161 IPR031052 GO:0006355
Aev02g0007 544 ProSiteProfiles Zinc finger CCHC-type profile. 400 415 IPR001878 GO:0003676|GO:0008270
Aev02g0007 544 MobiDBLite consensus disorder prediction 1 17 - -
Aev02g0007 544 MobiDBLite consensus disorder prediction 18 32 - -
Aev02g0007 544 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 162 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0007 Aev-Chr2 46223 49095 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev02g0007 FAR1 2.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0007 - - ahf:112709549 219.935