Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3172 ATGATTTCGATTTTGTCCTTGTCAAACATTAAAAATTCCATGGACTATCCCTCTCATTCCAGACACTGCATCATCATCATTCTCCCTTCTTCCTCTTCCTCCTTCATCCTCATCTCATCCTCAAATCTGAGGAAGAACACAAACGAGGCATCGAGAGCGACCGCACTACCAGCCACCACCATTGCAAGCCACCGTACTATCAGAGATGAGATTGAACAGATCACCCCACAGGCATCTTTCCCCTTTGAAGCCATGGCGCTGATCCTGCATACATGGAAAACTAACAAAAATGCTTACAAGGCGCTCATTGCGGCGGAGTATGCCGGTGTCCATGTTGAATTGGCCCCAAATTTTGAGATGGGCGTCTCTAACAAAACTCCTGAATTTCTCAAGATGAACCCTATCGGCAAGGTTCCTGTGTTGGAAACGCCAGAAGGTCCCGTTTTTGAGAGCAATGCCATTGCTCGTTATGTTGCTCGATTGAAGGGTGACAGTACCTTGTACGGTTCTTCTTCCATTGATTATGGCCACATTGAACAATGGATTGATTTTTCATCATTGGAGATTGATGCTAATATTAATAAGTGGTACTACCCAAGGATTGGACTAATGCCATACCTTCCCCCTGCTGAGGAGGCTGCAATTTCTGCTCTGAAGAGAGCCTTGAGTGCTTTGAACACACACCTTGCCTACAATACTTACCTGGTTGGGCATTCTGTGACCCTGGCTGACATCATAACAACGTGCAATTTGTACTTGGGTTTTACTAATATCTTAGTCAAGAGTTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAGCCAAACTTCCAAAAGATATTTGGTCTGGTCAAGCAGGCTGAAGCTGTCCCGCCTATTCAATCTGCAAAGAAGCCTTCGCAGCCGAAAGAATCTAAGCCCAAGATTAAGGATGAACCAAAGAAGGAGGCAAAGAAAGAGGTCAAGCAAGAGCCAGAAAATCCCAAAGATGAAGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCTCCAAGTAAGATGATACTGGATGAGTGGAAAAGGCTCTACTCAAACACCAAAACCAATTTCCGGGAGGTTGCAATCAAAGGATTCTGGGACATGTATGATCCCGAGGGATACTCTCTCTGGTTTTGCAATTACAAATACAATGAAGAGAACACTGTTTCCTTTGTGACATTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCCCGCAAGTATGCATTTGGAAAGATGCTTGTGATTGGATCTGAGCCTCCCTTTAAGGTGAAGGGGTTGTGGCTTTTCCGTGGGCAAGAAATCCCACAATTTGTGATTGATGAATGCTATGACATGGAGCTGTACGAATGGACCAAGGTTGACATATCCGATGAATCTCAAAAGGAGCGCGTTAATCAGATGATTGAAGATCAAGAACCTTTTGAGGGAGAACCTCTTTTGGATGCTAAATGCTTTAAGTGA 1518 0.4453 MISILSLSNIKNSMDYPSHSRHCIIIILPSSSSSFILISSSNLRKNTNEASRATALPATTIASHRTIRDEIEQITPQASFPFEAMALILHTWKTNKNAYKALIAAEYAGVHVELAPNFEMGVSNKTPEFLKMNPIGKVPVLETPEGPVFESNAIARYVARLKGDSTLYGSSSIDYGHIEQWIDFSSLEIDANINKWYYPRIGLMPYLPPAEEAAISALKRALSALNTHLAYNTYLVGHSVTLADIITTCNLYLGFTNILVKSFTSEFPHVERYFWTLVNQPNFQKIFGLVKQAEAVPPIQSAKKPSQPKESKPKIKDEPKKEAKKEVKQEPENPKDEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCNYKYNEENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDESQKERVNQMIEDQEPFEGEPLLDAKCFK* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3172 505 SMART EF1G_2 344 452 IPR001662 GO:0003746|GO:0006414
Aev01g3172 505 SFLD Main (cytGST) 89 274 - -
Aev01g3172 505 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 85 166 IPR004045 -
Aev01g3172 505 CDD GST_C_EF1Bgamma_like 174 294 - -
Aev01g3172 505 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 171 299 IPR010987 -
Aev01g3172 505 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 85 505 IPR044628 GO:0004364
Aev01g3172 505 PANTHER - 85 505 - -
Aev01g3172 505 SUPERFAMILY Thioredoxin-like 78 169 IPR036249 -
Aev01g3172 505 CDD GST_N_EF1Bgamma 89 161 - -
Aev01g3172 505 MobiDBLite consensus disorder prediction 307 345 - -
Aev01g3172 505 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 345 505 IPR001662 GO:0003746|GO:0006414
Aev01g3172 505 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 345 505 IPR036433 GO:0003746|GO:0006414
Aev01g3172 505 SUPERFAMILY eEF1-gamma domain 345 505 IPR036433 GO:0003746|GO:0006414
Aev01g3172 505 SFLD Glutathione Transferase (cytosolic) 89 274 IPR040079 -
Aev01g3172 505 MobiDBLite consensus disorder prediction 298 353 - -
Aev01g3172 505 Gene3D Glutaredoxin 84 158 - -
Aev01g3172 505 SUPERFAMILY GST C-terminal domain-like 157 297 IPR036282 -
Aev01g3172 505 Gene3D - 164 298 - -
Aev01g3172 505 Pfam Glutathione S-transferase, N-terminal domain 85 160 IPR004045 -
Aev01g3172 505 Pfam Elongation factor 1 gamma, conserved domain 344 452 IPR001662 GO:0003746|GO:0006414
Aev01g3172 505 Pfam Glutathione S-transferase, C-terminal domain 212 281 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3172 Aev-Chr1 32667371 32673921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3172 85 505 Eukaryotic Initiation Factors Gene Family AT1G57720 73.872 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3172 K03233 - gmx:547637 701.819